RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GAS8O95995 478 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 HPP00738 406 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 UGT2B4P06133 528 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 IVLP07476 585 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 FREM3P0C091 2139 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 EZRP15311 586 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 AREGP15514 252 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 RPL35AP18077 110 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 TNNI1P19237 187 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 PTMSP20962 102 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 OMGP23515 440 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 CYLC1P35663 651 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 RFC3P40938 356 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 SLC8A3P57103 927 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 VSX2P58304 361 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 KRTAP10-3P60369 221 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 BTG1P62324 171 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 TSTA3Q13630 321 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 CEACAM7Q14002 265 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 ZNHIT3Q15649 155 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 ZNF699Q32M78 642 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 C1orf185Q5T7R7 199 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 PRAMEF7Q5VXH5 474 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 SPINK14Q6IE38 97 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 ZCCHC12Q6PEW1 402 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 MFSD7Q6UXD7 560 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 ELMOD2Q8IZ81 293 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 GPD1LQ8N335 351 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 TEX26Q8N6G2 289 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 ZNF525Q8N782 197 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 CCNYQ8ND76 341 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 TRPV3Q8NET8 790 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 TMEM185AQ8NFB2 350 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 OR5AP2Q8NGF4 316 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 OR10G8Q8NGN5 311 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 SLC35C1Q96A29 364 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 NUS1Q96E22 293 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 C18orf15Q96N68 181 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 PSMB7Q99436 277 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 NKX3-1Q99801 234 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 SLC6A7Q99884 636 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 PITPNM3Q9BZ71 974 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 C1orf21Q9H246 121 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 UCK1Q9HA47 277 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 PIGVQ9NUD9 493 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 DHCR7Q9UBM7 475 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 XPO7Q9UIA9 1087 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 TSPAN16Q9UKR8 245 aa3.72□□□□□ -1.81
ECHDC1-223ENST00000534442 EXPH5Q8NEV8 1989 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 KIAA1549Q9HCM3 1950 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 DNAH11Q96DT5 4516 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ATP6AP2A0A1C7CYW4 349 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 WI2-2373I1.2A0A1W2PRP0 233 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 MACROD2A1Z1Q3 448 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 IKBKBO14920 756 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 PCDH7O60245 1069 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 CLDN11O75508 207 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 B3GALNT1O75752 331 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 POP4O95707 220 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 EPOP01588 193 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 APOEP02649 317 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 PATE4P0C8F1 98 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 IL10P22301 178 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 CRYGSP22914 178 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 HNRNPFP52597 415 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 XGP55808 180 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 KCNJ10P78508 379 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ORC2Q13416 577 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 SPHARQ15513 63 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 OR1C1Q15619 314 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 STX1AQ16623 288 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 SGSM1Q2NKQ1 1148 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 TFDP3Q5H9I0 405 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 TOR1AIP1Q5JTV8 583 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 FFAR4Q5NUL3 377 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 PNCKQ6P2M8 343 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 DLEU7Q6UYE1 221 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF720Q7Z2F6 126 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 DCUN1D3Q8IWE4 304 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 FBXL16Q8N461 479 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 KIR3DL3Q8N743 410 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 NIPA2Q8N8Q9 360 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 OR6K2Q8NGY2 324 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 UBTD2Q8WUN7 234 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNRF4Q8WWF5 429 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 BTN2A3PQ96KV6 586 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 SERPINB11Q96P15 392 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 RPRD1AQ96P16 312 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 UHRF2Q96PU4 802 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 GSDMAQ96QA5 445 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 OR2M4Q96R27 311 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 CBWD1Q9BRT8 395 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 CCM2Q9BSQ5 444 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 RBM24Q9BX46 236 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 TDRD1Q9BXT4 1180 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 RAB33BQ9H082 229 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 KLHL28Q9NXS3 571 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 ZNF226Q9NYT6 803 aa3.71□□□□□ -1.82
ECHDC1-223ENST00000534442 DNPEPQ9ULA0 475 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms