RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 C10orf111Q8N326 155 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 OR9K2Q8NGE7 335 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 LILRB1Q8NHL6 650 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 GTPBP3Q969Y2 492 aaKnown RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 C3orf49Q96BT1 292 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 SLC25A36Q96CQ1 311 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 C1QTNF6Q9BXI9 259 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 GSX2Q9BZM3 304 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 IKZF5Q9H5V7 419 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 VIPAS39Q9H9C1 493 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 BCL2L10Q9HD36 194 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 SLC7A10Q9NS82 523 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 PARPBPQ9NWS1 579 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 TAS2R16Q9NYV7 291 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 NPAP1Q9NZP6 1156 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 SLC13A4Q9UKG4 626 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 CSPG4Q6UVK1 2322 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 A0A0G2JND7 137 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 M0R1B8 84 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ABCD4O14678 606 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ANGPT2O15123 496 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 KRT33AO76009 404 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ITGA5P08648 1049 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ETS2P15036 469 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 H2AFXP16104 143 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 PTNP21246 168 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 SLC6A2P23975 617 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 CDKN1AP38936 164 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 RPS5P46782 204 aaKnown RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 CDH11P55287 796 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 NCALDP61601 193 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 IL1RL1Q01638 556 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 SF3A3Q12874 501 aaKnown RBP eCLIP9.19□□□□□ -0.945e-11■■■■■ 28
CAPN1-225ENST00000533704 ZNF672Q499Z4 452 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 TSPO2Q5TGU0 170 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 REEP3Q6NUK4 255 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 KLHL17Q6TDP4 642 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 CLEC9AQ6UXN8 241 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 DHDDSQ86SQ9 333 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 P2RY8Q86VZ1 359 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 CIARTQ8N365 385 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 SMAP2Q8WU79 429 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF385AQ96PM9 386 aaKnown RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 BDH2Q9BUT1 245 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 SPATA5L1Q9BVQ7 753 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 PRR14Q9BWN1 585 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ALG2Q9H553 416 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 RABEP2Q9H5N1 569 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 SLC52A3Q9NQ40 469 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 CISD1Q9NZ45 108 aaKnown RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 MALT1Q9UDY8 824 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 LEF1Q9UJU2 399 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 POU2F3Q9UKI9 436 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 PRDM4Q9UKN5 801 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 TRIM33Q9UPN9 1127 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 CORO2BQ9UQ03 480 aa9.19□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF469Q96JG9 3925 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-225ENST00000533704 A0A1B0GWA3 101 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 AQP7P3A6NL99 342 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM229AB2RXF0 380 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 TPST1O60507 370 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 EDF1O60869 148 aaKnown RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SOD3P08294 240 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 CR1P17927 2039 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 CBLP22681 906 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 PRKAR1BP31321 381 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 RGS8P57771 180 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 MTPNP58546 118 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 LTBQ06643 244 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 LGALS3BPQ08380 585 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SPOCK1Q08629 439 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 NFYCQ13952 458 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 GABRA6Q16445 453 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 CYP51A1Q16850 503 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 OR7E24Q6IFN5 339 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SLC22A25Q6T423 547 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 PRSS57Q6UWY2 283 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 COMTD1Q86VU5 262 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 KDM8Q8N371 416 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM45BQ96B21 275 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 KTI12Q96EK9 354 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF607Q96SK3 696 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 CPPED1Q9BRF8 314 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SF3B5Q9BWJ5 86 aaKnown RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 TRIM2Q9C040 744 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SLCO5A1Q9H2Y9 848 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SELENONQ9NZV5 590 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 ANGPT4Q9Y264 503 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 NDUFAF1Q9Y375 327 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 MAGED1Q9Y5V3 778 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 SLC25A15Q9Y619 301 aa9.18□□□□□ -0.94
CAPN1-225ENST00000533704 NSD1Q96L73 2696 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-225ENST00000533704 TRBV5-3A0A0A0MS03 114 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 PRORSD1PA6NEY8 169 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SHISA9B4DS77 424 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SERPINB7O75635 380 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SASH3O75995 380 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms