RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 BNIP2Q12982 314 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 EFNB3Q15768 340 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
COPB1-209ENST00000533096 NIPAL3Q6P499 406 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
COPB1-209ENST00000533096 CARM1Q86X55 608 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 RIMKLAQ8IXN7 391 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 ZNF786Q8N393 782 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 OR4F15Q8NGB8 312 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 OR1K1Q8NGR3 316 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 PPP1R36Q96LQ0 422 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 C16orf45Q96MC5 204 aaPredicted RBP11.3□□□□□ -0.6
COPB1-209ENST00000533096 KATNB1Q9BVA0 655 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 PCDHB14Q9Y5E9 798 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 ZNF208O43345 1280 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 UPK3AO75631 287 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 AGR2O95994 175 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 GPIP06744 558 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 TACSTD2P09758 323 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 CREB1P16220 341 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 CHI3L1P36222 383 aaPredicted RBP11.29□□□□□ -0.6
COPB1-209ENST00000533096 CAPZA2P47755 286 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 PPOXP50336 477 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 DVL1P1P54792 670 aaPredicted RBP11.29□□□□□ -0.6
COPB1-209ENST00000533096 PCLAFQ15004 111 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 SHQ1Q6PI26 577 aaKnown RBP11.29□□□□□ -0.6
COPB1-209ENST00000533096 PAQR6Q6TCH4 344 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 RNF165Q6ZSG1 346 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 GLCCI1Q86VQ1 547 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 KDM8Q8N371 416 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
COPB1-209ENST00000533096 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 MECRQ9BV79 373 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 OBP2BQ9NPH6 170 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 TREM2Q9NZC2 230 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 ZDHHC2Q9UIJ5 367 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
COPB1-209ENST00000533096 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 TLDC2A0PJX2 215 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 LIPT2A6NK58 231 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 B4DSR2 109 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 C1QCP02747 245 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 GKN3PP0CG01 181 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 PCMT1P22061 227 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 UQCRC2P22695 453 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 COL8A2P25067 703 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 CLDN8P56748 225 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 HPCAP84074 193 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 NPRL3Q12980 569 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 SYPL1Q16563 259 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 CREB3L2Q70SY1 520 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 PEG10Q86TG7 708 aaKnown RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 GSPT2Q8IYD1 628 aaKnown RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 CKAP2Q8WWK9 683 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 SLC25A36Q96CQ1 311 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 ANKRD27Q96NW4 1050 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 ALKBH3Q96Q83 286 aaPredicted RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 RHOXF2Q9BQY4 288 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 TAPBPLQ9BX59 468 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 DPY30Q9C005 99 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 MARCOQ9UEW3 520 aaPredicted RBP11.28□□□□□ -0.6
COPB1-209ENST00000533096 PCDHB10Q9UN67 800 aa11.28□□□□□ -0.6
COPB1-209ENST00000533096 PRAMEF27A3QJZ7 478 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 CFAP73A6NFT4 308 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 NPHS1O60500 1241 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 PDE5AO76074 875 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 IL7RP16871 459 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 ROR2Q01974 943 aaKnown RBP11.27□□□□□ -0.61
COPB1-209ENST00000533096 FUT5Q11128 374 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 RIN1Q13671 783 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 XKR7Q5GH72 579 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 UGT2A3Q6UWM9 527 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 MYPOPQ86VE0 399 aaPredicted RBP11.27□□□□□ -0.61
COPB1-209ENST00000533096 EPS8L3Q8TE67 593 aaKnown RBP11.27□□□□□ -0.61
COPB1-209ENST00000533096 LRRC37BQ96QE4 947 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 SAP130Q9H0E3 1048 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 EXOSC3Q9NQT5 275 aaKnown RBP11.27□□□□□ -0.61
COPB1-209ENST00000533096 POLE3Q9NRF9 147 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 REV1Q9UBZ9 1251 aa11.27□□□□□ -0.61
COPB1-209ENST00000533096 A0A0A6YYJ9 748 aa11.26□□□□□ -0.61
COPB1-209ENST00000533096 PRSS51A0A1B0GVH4 220 aa11.26□□□□□ -0.61
COPB1-209ENST00000533096 AQP7P3A6NL99 342 aa11.26□□□□□ -0.61
COPB1-209ENST00000533096 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms