RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TRIM2Q9C040 744 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 PIF1Q9H611 641 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 TAS2R16Q9NYV7 291 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 SLC13A4Q9UKG4 626 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 RAI1Q7Z5J4 1906 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-204ENST00000532550 FLNAP21333 2647 aaKnown RBP15.19■□□□□ 0.02
PHRF1-204ENST00000532550 USF3Q68DE3 2245 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 DPRXA6NFQ7 191 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 AQP7P3A6NL99 342 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 AHSA1O95433 338 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 BSPH1Q075Z2 132 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 ADRM1Q16186 407 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 Q5PR19 223 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 ADAM5Q6NVV9 412 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 AAED1Q7RTV5 226 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 OR9K2Q8NGE7 335 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 OR52E4Q8NGH9 312 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 MFSD8Q8NHS3 518 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 DNAJA4Q8WW22 397 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-204ENST00000532550 TMEM45BQ96B21 275 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 SLC25A36Q96CQ1 311 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 PERPQ96FX8 193 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 ANKRD27Q96NW4 1050 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 CGREF1Q99674 301 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 CPPED1Q9BRF8 314 aaPredicted RBP15.19■□□□□ 0.02
PHRF1-204ENST00000532550 CXorf56Q9H5V9 222 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 ZNF385DQ9H6B1 395 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 C12orf10Q9HB07 376 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 MALT1Q9UDY8 824 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 ANGPT4Q9Y264 503 aa15.19■□□□□ 0.02
PHRF1-204ENST00000532550 TMEM229AB2RXF0 380 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 TPST1O60507 370 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 TMCC2O75069 709 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 NPIPB7O75200 414 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 TROVE2P10155 538 aaKnown RBP eCLIP15.18■□□□□ 0.02
PHRF1-204ENST00000532550 GTF2E2P29084 291 aaKnown RBP15.18■□□□□ 0.02
PHRF1-204ENST00000532550 AQP1P29972 269 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 RBBP4Q09028 425 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 NFYCQ13952 458 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 CYP51A1Q16850 503 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 PRSS57Q6UWY2 283 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 ARMC8Q8IUR7 673 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 LSMEM1Q8N8F7 131 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 C11orf65Q8NCR3 313 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 FBXW5Q969U6 566 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 MUS81Q96NY9 551 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 TMEM120AQ9BXJ8 343 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 RSPO3Q9BXY4 272 aaPredicted RBP15.18■□□□□ 0.02
PHRF1-204ENST00000532550 HEATR1Q9H583 2144 aaKnown RBP15.18■□□□□ 0.02
PHRF1-204ENST00000532550 TMEM27Q9HBJ8 222 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 SLC7A10Q9NS82 523 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 SELENONQ9NZV5 590 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 LAMP3Q9UQV4 416 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 RASD1Q9Y272 281 aa15.18■□□□□ 0.02
PHRF1-204ENST00000532550 A0A1B0GWA3 101 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 OR2T1O43869 369 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 KRT33AO76009 404 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 PNMTP11086 282 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 RPS5P46782 204 aaKnown RBP15.17■□□□□ 0.02
PHRF1-204ENST00000532550 RGS8P57771 180 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-204ENST00000532550 MTPNP58546 118 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 NCALDP61601 193 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 TGFBR3Q03167 851 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 GABRA6Q16445 453 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 GLIPR1L2Q4G1C9 344 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 TSPO2Q5TGU0 170 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 C9orf135Q5VTT2 229 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 ULK3Q6PHR2 472 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 KLHL17Q6TDP4 642 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 YTHDF3Q7Z739 585 aaKnown RBP15.17■□□□□ 0.02
PHRF1-204ENST00000532550 RETREG3Q86VR2 466 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 KRTAP1-3Q8IUG1 177 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 ZIC4Q8N9L1 334 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 POMGNT2Q8NAT1 580 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 OR52N5Q8NH56 324 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 LILRB1Q8NHL6 650 aaPredicted RBP15.17■□□□□ 0.02
PHRF1-204ENST00000532550 RNF217Q8TC41 542 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 SLC47A1Q96FL8 570 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 ZNF385AQ96PM9 386 aaKnown RBP15.17■□□□□ 0.02
PHRF1-204ENST00000532550 PRR14Q9BWN1 585 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 GSX2Q9BZM3 304 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 EVA1AQ9H8M9 152 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 DLL4Q9NR61 685 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 MRGBPQ9NV56 204 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 ZFHX3Q15911 3703 aa15.17■□□□□ 0.02
PHRF1-204ENST00000532550 MFN2O95140 757 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 ITGA5P08648 1049 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 VIMP08670 466 aaKnown RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 HTR2AP28223 471 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 PTH2RP49190 550 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 ARFIP2P53365 341 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 FOXG1P55316 489 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 EGR4Q05215 589 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 CYLC2Q14093 348 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 ZNF672Q499Z4 452 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 HSP90B2PQ58FF3 399 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 ALG10BQ5I7T1 473 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 FAM91A1Q658Y4 838 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 C5orf46Q6UWT4 87 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 C6orf89Q6UWU4 347 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 259.9 ms