RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PMS2P2O95744 297 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 CSF3P09919 207 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 COX4I1P13073 169 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 PGCP20142 388 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 MATN1P21941 496 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 MAPK1P28482 360 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 SOAT1P35610 550 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 SLC16A1P53985 500 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 CHRNB3Q05901 458 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 CYLC2Q14093 348 aaPredicted RBP15.16■□□□□ 0.02
PKP3-208ENST00000531857 GGTLC2Q14390 218 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 GSTA3Q16772 222 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 MST1LQ2TV78 715 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 TRMT5Q32P41 509 aaKnown RBP15.16■□□□□ 0.02
PKP3-208ENST00000531857 XKR7Q5GH72 579 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 FAM120AOSQ5T036 256 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 IL23RQ5VWK5 629 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 OR7E24Q6IFN5 339 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 RIMKLAQ8IXN7 391 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 PRR14Q9BWN1 585 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 CADM1Q9BY67 442 aaKnown RBP15.16■□□□□ 0.02
PKP3-208ENST00000531857 ZNF385DQ9H6B1 395 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 EFCAB1Q9HAE3 211 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 ANK2Q01484 3957 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 LOC100289279A0A1B0GTE1 492 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 E9PBE3 544 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 ATP6V1G2-DDX39BF2Z307 99 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 GPR171O14626 319 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 ATP6V1G2O95670 118 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 EPHA3P29320 983 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 APOBEC3AP31941 199 aaPredicted RBP15.15■□□□□ 0.02
PKP3-208ENST00000531857 RYKP34925 604 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 APOBEC1P41238 236 aaKnown RBP15.15■□□□□ 0.02
PKP3-208ENST00000531857 GZMKP49863 264 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 PDCD2Q16342 344 aaPredicted RBP15.15■□□□□ 0.02
PKP3-208ENST00000531857 ARHGAP11BQ3KRB8 267 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 C6orf136Q5SQH8 315 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 FAM166AQ6J272 317 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 OGFOD2Q6N063 350 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 EIF3MQ7L2H7 374 aaKnown RBP15.15■□□□□ 0.02
PKP3-208ENST00000531857 C6orf120Q7Z4R8 191 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 NET1Q7Z628 596 aaPredicted RBP15.15■□□□□ 0.02
PKP3-208ENST00000531857 CLECL1Q8IZS7 167 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 NATD1Q8N6N6 113 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 FAM71CQ8NEG0 241 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 PIGXQ8TBF5 258 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 MSI2Q96DH6 328 aaKnown RBP15.15■□□□□ 0.02
PKP3-208ENST00000531857 ZHX1-C8orf76Q96EF9 292 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 ANKRD27Q96NW4 1050 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 OR52B2Q96RD2 323 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 DUSP26Q9BV47 211 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 ZNF350Q9GZX5 532 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 FKRPQ9H9S5 495 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 SLC17A5Q9NRA2 495 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 SLC7A10Q9NS82 523 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 CHRNA9Q9UGM1 479 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 KCNS2Q9ULS6 477 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 PMF1-BGLAPU3KQ54 211 aa15.15■□□□□ 0.02
PKP3-208ENST00000531857 BBIP1A8MTZ0 92 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 BMP4P12644 408 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 LBPP18428 481 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 CCNA2P20248 432 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 NR4A2P43354 598 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 OR2B6P58173 313 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 PHC1P78364 1004 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 PLAURQ03405 335 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 SWI5Q1ZZU3 235 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 ATP6AP1LQ52LC2 224 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 CASP12Q6UXS9 341 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 RINLQ6ZS11 566 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 HMGN2P46Q86SG4 172 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 ADGRG3Q86Y34 549 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 RBM15BQ8NDT2 890 aaKnown RBP15.14■□□□□ 0.01
PKP3-208ENST00000531857 ZNF563Q8TA94 476 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 C3orf49Q96BT1 292 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 FBXO17Q96EF6 278 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 SORCS2Q96PQ0 1159 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 PRPF18Q99633 342 aaKnown RBP15.14■□□□□ 0.01
PKP3-208ENST00000531857 BHLHE41Q9C0J9 482 aaPredicted RBP15.14■□□□□ 0.01
PKP3-208ENST00000531857 WDR55Q9H6Y2 383 aaPredicted RBP15.14■□□□□ 0.01
PKP3-208ENST00000531857 DCLRE1BQ9H816 532 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 MOKQ9UQ07 419 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 HDGFL3Q9Y3E1 203 aa15.14■□□□□ 0.01
PKP3-208ENST00000531857 SPIN1Q9Y657 262 aaPredicted RBP15.14■□□□□ 0.01
PKP3-208ENST00000531857 IGHV4-61A0A0C4DH41 118 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 DUXAA6NLW8 204 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 AK1P00568 194 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 IDO1P14902 403 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 PRPS1L1P21108 318 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 MAGEA8P43361 318 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 PDLIM4P50479 330 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 H3F3AP84243 136 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 PGS1Q32NB8 556 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 SPATS1Q496A3 300 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 COQ5Q5HYK3 327 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 TSPO2Q5TGU0 170 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 TYW3Q6IPR3 259 aaKnown RBP15.13■□□□□ 0.01
PKP3-208ENST00000531857 BHLHB9Q6PI77 547 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 C16orf62Q7Z3J2 963 aa15.13■□□□□ 0.01
PKP3-208ENST00000531857 GRINAQ7Z429 371 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms