RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ACTL6AO96019 429 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 IGHG3P01860 377 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 HIST1H2ABP04908 130 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 IGFBP1P08833 259 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-205ENST00000531303 FPR3P25089 353 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 FKBP2P26885 142 aaKnown RBP17.12■□□□□ 0.33
SMPD1-205ENST00000531303 VHLP40337 213 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 CLK1P49759 484 aaKnown RBP17.12■□□□□ 0.33
SMPD1-205ENST00000531303 LHX2P50458 406 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 HIST3H2AQ7L7L0 130 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 OAFQ86UD1 273 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 GGNQ86UU5 652 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 HIST1H2ACQ93077 130 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 RIBC2Q9H4K1 309 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 USE1Q9NZ43 259 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 SEC14L4Q9UDX3 406 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 POFUT2Q9Y2G5 429 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 HDGFL3Q9Y3E1 203 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 GTF3C1Q12789 2109 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 A0A1B0GTH9 108 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 LIPT2A6NK58 231 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 OR2T1O43869 369 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 SNAP29O95721 258 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 POU1F1P28069 291 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 GTF2E2P29084 291 aaKnown RBP17.11■□□□□ 0.33
SMPD1-205ENST00000531303 GRPRP30550 384 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 EIF1AXP47813 144 aaKnown RBP17.11■□□□□ 0.33
SMPD1-205ENST00000531303 DIO1P49895 249 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 HBMQ6B0K9 141 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 VASNQ6EMK4 673 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 TMPPEQ6ZT21 453 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 MAMDC2Q7Z304 686 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-205ENST00000531303 PACRGLQ8N7B6 248 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 MFSD8Q8NHS3 518 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 SNRNP40Q96DI7 357 aaKnown RBP17.11■□□□□ 0.33
SMPD1-205ENST00000531303 TNFRSF13CQ96RJ3 184 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 TIMP4Q99727 224 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 CAMK2AQ9UQM7 478 aa17.11■□□□□ 0.33
SMPD1-205ENST00000531303 KIAA1549Q9HCM3 1950 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 TTLL8A6PVC2 850 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 NPIPA2E9PIF3 369 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 NPIPA3F8WFD2 350 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 BLOC1S5-TXNDC5H3BN57 136 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 HPRP00739 348 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 ZNF708P17019 499 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 GSTM3P21266 225 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 AQP4P55087 323 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 CLDN15P56746 228 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 CLDN18P56856 261 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 CARD18P57730 90 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 NUP107P57740 925 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 CTU2Q2VPK5 515 aaKnown RBP17.1■□□□□ 0.33
SMPD1-205ENST00000531303 IZUMO2Q6UXV1 221 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 ESPNLQ6ZVH7 1005 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 KIF18BQ86Y91 864 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 MEIOBQ8N635 442 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 OR2V1Q8NHB1 315 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 OSTF1Q92882 214 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 EGLN3Q9H6Z9 239 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 FKRPQ9H9S5 495 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 C8orf4Q9NR00 106 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 ASF1BQ9NVP2 202 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 IL20RAQ9UHF4 553 aa17.1■□□□□ 0.33
SMPD1-205ENST00000531303 HTR3EA5X5Y0 456 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 FTCDNL1E5RQL4 147 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 H3BN98 237 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 M0R082 166 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 CXCL13O43927 109 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 AKR7A3O95154 331 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 MT-ATP6P00846 226 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 IGF2P01344 180 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 KLK2P20151 261 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 POLR2IP36954 125 aaKnown RBP17.09■□□□□ 0.33
SMPD1-205ENST00000531303 RAD23AP54725 363 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 PMS2P3Q13401 168 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 SGCBQ16585 318 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 SLC36A3Q495N2 470 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 NHSL2Q5HYW2 709 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 NANOGNBQ7Z5D8 188 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 OR10D3Q8NH80 312 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 ZNF417Q8TAU3 575 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 FAR1Q8WVX9 515 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 MIB2Q96AX9 1013 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 GPR137Q96N19 417 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 ZNF587Q96SQ5 575 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-205ENST00000531303 ASPNQ9BXN1 380 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 SRXN1Q9BYN0 137 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 TOR3AQ9H497 397 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 SMPD3Q9NY59 655 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-205ENST00000531303 REV1Q9UBZ9 1251 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 ZNF229Q9UJW7 825 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 TRAPPC4Q9Y296 219 aa17.09■□□□□ 0.33
SMPD1-205ENST00000531303 EPG5Q9HCE0 2579 aa17.08■□□□□ 0.33
SMPD1-205ENST00000531303 IGHV3-15A0A0B4J1V0 119 aa17.08■□□□□ 0.32
SMPD1-205ENST00000531303 A0A1B0GVC2 190 aa17.08■□□□□ 0.32
SMPD1-205ENST00000531303 AQP7O14520 342 aa17.08■□□□□ 0.32
SMPD1-205ENST00000531303 PMS2P2O95744 297 aa17.08■□□□□ 0.32
SMPD1-205ENST00000531303 ASAH2BP0C7U1 165 aa17.08■□□□□ 0.32
SMPD1-205ENST00000531303 OSMP13725 252 aa17.08■□□□□ 0.32
SMPD1-205ENST00000531303 SLC35A1P78382 337 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms