RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 H3F3AP84243 136 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 FOXL1Q12952 345 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 SLC17A1Q14916 467 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 GPR68Q15743 365 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 ZNF141Q15928 474 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 MIDNQ504T8 468 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 C6orf136Q5SQH8 315 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 FAHD2BQ6P2I3 314 aaPredicted RBP9.03□□□□□ -0.96
COPB1-207ENST00000529866 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 RIMKLAQ8IXN7 391 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 CLECL1Q8IZS7 167 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 CNPY4Q8N129 248 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 CLEC4FQ8N1N0 589 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 RIBC1Q8N443 379 aaPredicted RBP9.03□□□□□ -0.96
COPB1-207ENST00000529866 OR5D16Q8NGK9 328 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 SFXN5Q8TD22 340 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 DDIT4LQ96D03 193 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 DNAJA3Q96EY1 480 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 FAHD2AQ96GK7 314 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 C20orf27Q9GZN8 174 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 GPATCH2Q9NW75 528 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.03□□□□□ -0.96
COPB1-207ENST00000529866 SLC35A3Q9Y2D2 325 aa9.03□□□□□ -0.96
COPB1-207ENST00000529866 V9GYY5 206 aaPredicted RBP9.03□□□□□ -0.96
COPB1-207ENST00000529866 HEATR1Q9H583 2144 aaKnown RBP9.02□□□□□ -0.96
COPB1-207ENST00000529866 ARPC4-TTLL3A0A0A6YYG9 625 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 TRAV20A0A0B4J274 112 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 SH3PXD2BA1X283 911 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 OR6C65A6NJZ3 312 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 DUXAA6NLW8 204 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 STX11O75558 287 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 C1QCP02747 245 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 RYKP34925 604 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 HTR3AP46098 478 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 POU3F1Q03052 451 aaPredicted RBP9.02□□□□□ -0.97
COPB1-207ENST00000529866 LSM12Q3MHD2 195 aaKnown RBP9.02□□□□□ -0.97
COPB1-207ENST00000529866 IL23RQ5VWK5 629 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 REP15Q6BDI9 236 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 ANKRD16Q6P6B7 361 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 PAQR6Q6TCH4 344 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 ZCCHC24Q8N2G6 241 aaKnown RBP9.02□□□□□ -0.97
COPB1-207ENST00000529866 BPIFB2Q8N4F0 458 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 NATD1Q8N6N6 113 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 FAM169BQ8N8A8 192 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 FNDC5Q8NAU1 212 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 OR1K1Q8NGR3 316 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 CLDND2Q8NHS1 167 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 PSMA8Q8TAA3 256 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 OIT3Q8WWZ8 545 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 OR5P2Q8WZ92 322 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 COQ8BQ96D53 544 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 TRIM44Q96DX7 344 aaPredicted RBP9.02□□□□□ -0.97
COPB1-207ENST00000529866 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 PPP3R2Q96LZ3 170 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 OR7D2Q96RA2 312 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 SDF2Q99470 211 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 DOK1Q99704 481 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 OR11A1Q9GZK7 315 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 NARFLQ9H6Q4 476 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 SLC52A3Q9NQ40 469 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 ATAD3AQ9NVI7 634 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 CRNNQ9UBG3 495 aaPredicted RBP9.02□□□□□ -0.97
COPB1-207ENST00000529866 KCNE5Q9UJ90 142 aa9.02□□□□□ -0.97
COPB1-207ENST00000529866 TMEM114B3SHH9 223 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 ZNF208O43345 1280 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 BCAS1O75363 584 aaPredicted RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 LGI1O95970 557 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 IGLV1-44P01699 117 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 ADRA2AP08913 450 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 GAAP10253 952 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 G6PDP11413 515 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 ANPEPP15144 967 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 CCNA2P20248 432 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 ACHEP22303 614 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 CALCRP30988 508 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 THBS4P35443 961 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 HBA1P69905 142 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 SLC9B1Q4ZJI4 515 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 OTUD3Q5T2D3 398 aaPredicted RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 C16orf62Q7Z3J2 963 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 HOMEZQ8IX15 550 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 CDK20Q8IZL9 346 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 ZNF781Q8N8C0 355 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 FAM71CQ8NEG0 241 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 OR9K2Q8NGE7 335 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 MAGEE2Q8TD90 523 aaPredicted RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.01□□□□□ -0.97
COPB1-207ENST00000529866 PMM1Q92871 262 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 ALKBH3Q96Q83 286 aaPredicted RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 SF3B5Q9BWJ5 86 aaKnown RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 ZNF350Q9GZX5 532 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 TPK1Q9H3S4 243 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 PIF1Q9H611 641 aa9.01□□□□□ -0.97
COPB1-207ENST00000529866 DDX28Q9NUL7 540 aaKnown RBP9.01□□□□□ -0.97
COPB1-207ENST00000529866 LOC105371242A0A075B767 164 aa9□□□□□ -0.97
COPB1-207ENST00000529866 A0A0G2JMP0 313 aa9□□□□□ -0.97
COPB1-207ENST00000529866 A0A0X1KG70 313 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms