RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SDHAF3Q9NRP4 125 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 SNTG1Q9NSN8 517 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 GALNT8Q9NY28 637 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 GPN3Q9UHW5 284 aaPredicted RBP13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 ADAMTS9Q9P2N4 1935 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 CDC14CA4D256 554 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 A8MVM7 634 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 D6RAR5 112 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 MEN1O00255 615 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 RNF13O43567 381 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 PLPP2O43688 288 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 OR2T1O43869 369 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 PRKNO60260 465 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TIAF1O95411 115 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 SDHAP31040 664 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 UQCRC1P31930 480 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 CENPAP49450 140 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 DLX5P56178 289 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 FABP5Q01469 135 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 MC2RQ01718 297 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 OXA1LQ15070 435 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 ZNF791Q3KP31 576 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TBC1D25Q3MII6 688 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 FAAH2Q6GMR7 532 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 MRPL14Q6P1L8 145 aaKnown RBP13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 PAMR1Q6UXH9 720 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 MAMDC2Q7Z304 686 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 NANOGNBQ7Z5D8 188 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 MS4A15Q8N5U1 240 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 PARP16Q8N5Y8 322 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 LRRC17Q8N6Y2 441 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 ARIH2OSQ8N7S6 290 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TMEM99Q8N816 258 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 GPR119Q8TDV5 335 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TMEM203Q969S6 136 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 LOXL4Q96JB6 756 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 SNX18Q96RF0 628 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 MNTQ99583 582 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 FSCN3Q9NQT6 498 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TAS2R10Q9NYW0 307 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 TRAPPC4Q9Y296 219 aa13.45□□□□□ -0.26
ECHDC1-220ENST00000528402 ANKUB1A6NFN9 424 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 BLOC1S5-TXNDC5H3BN57 136 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 GLCEO94923 617 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 NUDT14O95848 222 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 SERPINA3P01011 423 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 CTXN1P60606 82 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 EGR4Q05215 589 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 MRPL28Q13084 256 aaKnown RBP13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 MFSD13AQ14CX5 517 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 VASH1Q7L8A9 365 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 FAM122BQ7Z309 247 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 KCTD20Q7Z5Y7 419 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 CYB561A3Q8NBI2 242 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 SDR9C7Q8NEX9 313 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 RNF138Q8WVD3 245 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 TRMT61AQ96FX7 289 aaKnown RBP13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 SPSB2Q99619 263 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 KCNS3Q9BQ31 491 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 CRB3Q9BUF7 120 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 KATNB1Q9BVA0 655 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 AKAP7Q9P0M2 348 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 GRHPRQ9UBQ7 328 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 ASCC3Q8N3C0 2202 aaKnown RBP13.44□□□□□ -0.26
ECHDC1-220ENST00000528402 GABRPO00591 440 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 TRIM3O75382 744 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 LDOC1O95751 146 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 LALBAP00709 142 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 RENP00797 406 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 BGLAPP02818 100 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 ACP1P24666 158 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 MST1P26927 711 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 SDC2P34741 201 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 AQP2P41181 271 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 GBX2P52951 348 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 ERVK-25P63136 954 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 ZNF85Q03923 595 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 QPRTQ15274 297 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 CCDC58Q4VC31 144 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 FCRLBQ6BAA4 426 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 MZT2AQ6P582 158 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 DBX2Q6ZNG2 339 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 SHISA6Q6ZSJ9 500 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 TPRA1Q86W33 373 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 TEX19Q8NA77 164 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 SLC22A8Q8TCC7 542 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 HGDQ93099 445 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 KTI12Q96EK9 354 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 DEPDC7Q96QD5 511 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 TIMP4Q99727 224 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 TM9SF2Q99805 663 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 CTRCQ99895 268 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 WDR77Q9BQA1 342 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 BARHL1Q9BZE3 327 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 SP140LQ9H930 580 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 ISG20L2Q9H9L3 353 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms