RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZNF433Q8N7K0 673 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-213ENST00000527897 SMYD1Q8NB12 490 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 C11orf65Q8NCR3 313 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 OR52N5Q8NH56 324 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 RSPO3Q9BXY4 272 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-213ENST00000527897 PIF1Q9H611 641 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 PARPBPQ9NWS1 579 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 SELENONQ9NZV5 590 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 RNF115Q9Y4L5 304 aa13.71□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF469Q96JG9 3925 aaPredicted RBP13.71□□□□□ -0.22
CAPN1-213ENST00000527897 A0A1B0GWA3 101 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 PRORSD1PA6NEY8 169 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 AQP7P3A6NL99 342 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 TMEM229AB2RXF0 380 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 HS3ST1O14792 307 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 CNOT4O95628 575 aaKnown RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 PTNP21246 168 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 CBLP22681 906 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 HTR2AP28223 471 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 FOXG1P55316 489 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 IL1RL1Q01638 556 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 BSPH1Q075Z2 132 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 MMEL1Q495T6 779 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 NCMAPQ5T1S8 102 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 ADAM5Q6NVV9 412 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 DPP10Q8N608 796 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 OR9K2Q8NGE7 335 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 STK35Q8TDR2 534 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 KTI12Q96EK9 354 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF385AQ96PM9 386 aaKnown RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 USB1Q9BQ65 265 aaKnown RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 TMUB1Q9BVT8 246 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 TAS2R16Q9NYV7 291 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 GMEB1Q9Y692 573 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 ARID1AO14497 2285 aa13.7□□□□□ -0.22
CAPN1-213ENST00000527897 RAI1Q7Z5J4 1906 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-213ENST00000527897 OR5H1A6NKK0 313 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 ARHGEF9O43307 516 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 KRT33AO76009 404 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 DMTNQ08495 405 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 ALG10BQ5I7T1 473 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 Q5PR19 223 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 TIMM23BQ5SRD1 257 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 TSPO2Q5TGU0 170 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 PTOV1Q86YD1 416 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 KDM8Q8N371 416 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 KBTBD8Q8NFY9 601 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 OR10A6Q8NH74 314 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 TSPEARQ8WU66 669 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 TMEM171Q8WVE6 324 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 NEUROG1Q92886 237 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 SLC35B4Q969S0 331 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 PIP5K1AQ99755 562 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 C1QTNF6Q9BXI9 259 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 TRIM2Q9C040 744 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 TMEM27Q9HBJ8 222 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 SLC7A10Q9NS82 523 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 MALT1Q9UDY8 824 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
CAPN1-213ENST00000527897 FLNAP21333 2647 aaKnown RBP13.69□□□□□ -0.22
CAPN1-213ENST00000527897 DPRXA6NFQ7 191 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 M0R3H8 397 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 FBP2O00757 339 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 NPIPB7O75200 414 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 MFN2O95140 757 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 HOXC12P31275 282 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 ZNF83P51522 516 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 RBBP4Q09028 425 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 KLF10Q13118 480 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 TRMT5Q32P41 509 aaKnown RBP13.68□□□□□ -0.22
CAPN1-213ENST00000527897 CGB2Q6NT52 195 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 RANBP3LQ86VV4 465 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-213ENST00000527897 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 BHLHE22Q8NFJ8 381 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-213ENST00000527897 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 SLC26A7Q8TE54 656 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 DNAJA4Q8WW22 397 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-213ENST00000527897 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 TMEM204Q9BSN7 226 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 SF3B5Q9BWJ5 86 aaKnown RBP13.68□□□□□ -0.22
CAPN1-213ENST00000527897 SEC14L4Q9UDX3 406 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 TESQ9UGI8 421 aaKnown RBP13.68□□□□□ -0.22
CAPN1-213ENST00000527897 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 ACANP16112 2415 aa13.68□□□□□ -0.22
CAPN1-213ENST00000527897 M0QX08 132 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 MRASO14807 208 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 ITGA5P08648 1049 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 PNMTP11086 282 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 EGR4Q05215 589 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-213ENST00000527897 OR1Q1Q15612 314 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 GABRA6Q16445 453 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 SHEQ5VZ18 495 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 OR7E24Q6IFN5 339 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 NIPAL3Q6P499 406 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 ULK3Q6PHR2 472 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 SEZ6L2Q6UXD5 910 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 CREB3L2Q70SY1 520 aa13.67□□□□□ -0.22
CAPN1-213ENST00000527897 P2RY8Q86VZ1 359 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms