RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 WDR74Q6RFH5 385 aaPredicted RBP13.86□□□□□ -0.19
USP47-207ENST00000527733 ELP5Q8TE02 316 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 NPIPB8E9PQR5 432 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 OR2J2O76002 312 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 CD79AP11912 226 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 EVI2BP34910 448 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 CARD18P57730 90 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 WACQ9BTA9 647 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 NUDT9Q9BW91 350 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 PRDM6Q9NQX0 595 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 POLHQ9Y253 713 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 CCL27Q9Y4X3 112 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 FAM172BPA6NC97 362 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 GGT3PA6NGU5 568 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 PSMB10P40306 273 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 CLDN17P56750 224 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 MLLT11Q13015 90 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 DNASE1L3Q13609 305 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 C3orf33Q6P1S2 294 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ZNF782Q6ZMW2 699 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 ASB17Q8WXJ9 295 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 TTC9Q92623 222 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ZNF582Q96NG8 517 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 RBMXL2O75526 392 aaKnown RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 NKX2-2O95096 273 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 CFL1P23528 166 aaKnown RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 LAIR1Q6GTX8 287 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 H1FNTQ75WM6 255 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 SLC35D2Q76EJ3 337 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 CNEP1R1Q8N9A8 125 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 SLC37A3Q8NCC5 494 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 PFN4Q8NHR9 129 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ZNF775Q96BV0 537 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 FOXN4Q96NZ1 517 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ENPP5Q9UJA9 477 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 NTNG1Q9Y2I2 539 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 H7C1C5 153 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ADH7P40394 386 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 LCN6P62502 163 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 TMEM244Q5VVB8 128 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 ZSCAN4Q8NAM6 433 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 ZNF764Q96H86 408 aaPredicted RBP13.85□□□□□ -0.19
USP47-207ENST00000527733 OR51E2Q9H255 320 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 POU2F3Q9UKI9 436 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 MIA3Q5JRA6 1907 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 SPTA1P02549 2419 aa13.85□□□□□ -0.19
USP47-207ENST00000527733 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 GPR171O14626 319 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 DRD5P21918 477 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 CAMK2DQ13557 499 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 RHBDD2Q6NTF9 364 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ZADH2Q8N4Q0 377 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ZNF417Q8TAU3 575 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ST8SIA1Q92185 356 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 GIMAP5Q96F15 307 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 SEMA4CQ9C0C4 833 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ASCC3Q8N3C0 2202 aaKnown RBP13.84□□□□□ -0.19
USP47-207ENST00000527733 OR2T7P0C7T2 308 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 PGAM2P15259 253 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ENPP1P22413 925 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 BMXP51813 675 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 BIDP55957 195 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 TPTEP56180 551 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 PCBD1P61457 104 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 PUDPQ08623 228 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 TMEM69Q5SWH9 247 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 B3GLCTQ6Y288 498 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 OVCH1Q7RTY7 1134 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 LIX1LQ8IVB5 337 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 OR2T27Q8NH04 317 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ZNF350Q9GZX5 532 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 DPAGT1Q9H3H5 408 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 KCNE3Q9Y6H6 103 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 PATE3B3GLJ2 98 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 H3BMQ9 156 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 STMND1H3BQB6 276 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ABOP16442 354 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 OR2G6Q5TZ20 316 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 CCDC107Q8WV48 283 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 FAM71F1Q96KD3 344 aaPredicted RBP13.84□□□□□ -0.19
USP47-207ENST00000527733 Q96M85 177 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 COG8Q96MW5 612 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 GABARAPL1Q9H0R8 117 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 ATG5Q9H1Y0 275 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 SYT4Q9H2B2 425 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 FN3KQ9H479 309 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 GPATCH2Q9NW75 528 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 LRFN1Q9P244 771 aa13.84□□□□□ -0.19
USP47-207ENST00000527733 A6NHS1 94 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 NOS1APO75052 506 aaPredicted RBP13.83□□□□□ -0.19
USP47-207ENST00000527733 POU3F4P49335 361 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 GXYLT1Q4G148 440 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 ACSM3Q53FZ2 586 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 SLC22A18ASQ8N1D0 253 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 SCGB3A2Q96PL1 93 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 HHLA2Q9UM44 414 aa13.83□□□□□ -0.19
USP47-207ENST00000527733 LOC102725191A0A1B0GVB3 256 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 CDHR4A6H8M9 788 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 HTR1FP30939 366 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms