RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 CCDC188H7C350 402 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 ZSCAN12O43309 604 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 UPK3AO75631 287 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 CLPXO76031 633 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 SEC14L2O76054 403 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 PPIAL4FP0DN26 164 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 ALKBH6Q3KRA9 238 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 RETREG3Q86VR2 466 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 GSPT2Q8IYD1 628 aaKnown RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 NOA1Q8NC60 698 aaKnown RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 ZNF317Q96PQ6 595 aaPredicted RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 MS4A7Q9GZW8 240 aaPredicted RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 LAT2Q9GZY6 243 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 HOXD1Q9GZZ0 328 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 PIGUQ9H490 435 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 ZNF385DQ9H6B1 395 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 DUSP22Q9NRW4 184 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 TMEM181Q9P2C4 612 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 CHRNA9Q9UGM1 479 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 PURGQ9UJV8 347 aaKnown RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 POLR3HQ9Y535 204 aaPredicted RBP11.46□□□□□ -0.57
SSRP1-203ENST00000526696 AUP1Q9Y679 476 aa11.46□□□□□ -0.57
SSRP1-203ENST00000526696 TET2Q6N021 2002 aaPredicted RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 ZNF587BE7ETH6 402 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 TRAF3IP2O43734 574 aaPredicted RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 BCAS1O75363 584 aaPredicted RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 ULK1O75385 1050 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 CYP7B1O75881 506 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 RSL1D1O76021 490 aaKnown RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 KRT6AP02538 564 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 KRT6BP04259 564 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 BCKDHAP12694 445 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 ATP6V1C1P21283 382 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 HSD17B3P37058 310 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 APOBEC1P41238 236 aaKnown RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 KRT6CP48668 564 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 SELENOPP49908 381 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 PROK1P58294 105 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 CCL8P80075 99 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 DR1Q01658 176 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 ZNF154Q13106 437 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 PDZK1Q5T2W1 519 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 MROH9Q5TGP6 573 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 KLC3Q6P597 504 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 ZCCHC12Q6PEW1 402 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 FIP1L1Q6UN15 594 aaKnown RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 C3orf62Q6ZUJ4 267 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 C9orf139Q6ZV77 190 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 MDP1Q86V88 176 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 GLB1L3Q8NCI6 653 aaPredicted RBP11.45□□□□□ -0.58
SSRP1-203ENST00000526696 OR9K2Q8NGE7 335 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 STACQ99469 402 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 TRIM31Q9BZY9 425 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 TRAPPC4Q9Y296 219 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 RNF114Q9Y508 228 aa11.45□□□□□ -0.58
SSRP1-203ENST00000526696 PDPK1O15530 556 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 URI1O94763 535 aaPredicted RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 HMGN2P05204 90 aaKnown RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 SBK3P0C264 359 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 ZNF12P17014 697 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 CCNA2P20248 432 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 GLRXP35754 106 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 FRKP42685 505 aaPredicted RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 RAD52P43351 418 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 LASP1Q14847 261 aaKnown RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 DCST2Q5T1A1 773 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 ABHD12BQ7Z5M8 362 aaPredicted RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 CCDC91Q7Z6B0 441 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 TREML1Q86YW5 311 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 TMEM234Q8WY98 164 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 GTF3AQ92664 365 aaKnown RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 FAM120BQ96EK7 910 aaKnown RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 C1QTNF3Q9BXJ4 246 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 SERHL2Q9H4I8 314 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 TCF7L1Q9HCS4 588 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 TNFRSF19Q9NS68 423 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 SIRT3Q9NTG7 399 aaPredicted RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 AURKAIP1Q9NWT8 199 aaPredicted RBP11.44□□□□□ -0.58
SSRP1-203ENST00000526696 GRHL1Q9NZI5 618 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 TIMM22Q9Y584 194 aa11.44□□□□□ -0.58
SSRP1-203ENST00000526696 C5orf63A6NC05 138 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 EIF1BO60739 113 aaKnown RBP11.43□□□□□ -0.58
SSRP1-203ENST00000526696 KRT33AO76009 404 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 UBTFL6P0CB48 400 aaPredicted RBP11.43□□□□□ -0.58
SSRP1-203ENST00000526696 ZNF35P13682 527 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
SSRP1-203ENST00000526696 EFNA1P20827 205 aaPredicted RBP11.43□□□□□ -0.58
SSRP1-203ENST00000526696 ARR3P36575 388 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 CRYBB2P43320 205 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 MTNR1AP48039 350 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 SLC35A1P78382 337 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 ARF1P84077 181 aaKnown RBP11.43□□□□□ -0.58
SSRP1-203ENST00000526696 CLCQ05315 142 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 HNRNPA0Q13151 305 aaKnown RBP11.43□□□□□ -0.58
SSRP1-203ENST00000526696 FXNQ16595 210 aa11.43□□□□□ -0.58
SSRP1-203ENST00000526696 PAQR6Q6TCH4 344 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms