RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 CEP78Q5JTW2 689 aa19.45■□□□□ 0.7
VPS28-205ENST00000526204 TOMM5Q8N4H5 51 aa19.45■□□□□ 0.7
VPS28-205ENST00000526204 OR5H6Q8NGV6 325 aa19.45■□□□□ 0.7
VPS28-205ENST00000526204 COPZ2Q9P299 210 aa19.45■□□□□ 0.7
VPS28-205ENST00000526204 SPATA2Q9UM82 520 aa19.45■□□□□ 0.7
VPS28-205ENST00000526204 PNMTP11086 282 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 BTCP35070 178 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 BIKQ13323 160 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 NNATQ16517 81 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 HSD17B12Q53GQ0 312 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 UNQ9370/PRO34162Q6UXP9 181 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 ZNF615Q8N8J6 731 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 HAVCR2Q8TDQ0 301 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 KLHDC7BQ96G42 594 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 HSPA12BQ96MM6 686 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 CYP8B1Q9UNU6 501 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 CAMK2AQ9UQM7 478 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 NUBP2Q9Y5Y2 271 aa19.44■□□□□ 0.7
VPS28-205ENST00000526204 LRRN3E7EW58 273 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 MAGEB4O15481 346 aaPredicted RBP19.43■□□□□ 0.7
VPS28-205ENST00000526204 TMEM127O75204 238 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 SNRPBP14678 240 aaKnown RBP19.43■□□□□ 0.7
VPS28-205ENST00000526204 MAOAP21397 527 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 GRK6P43250 576 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 SERTAD2Q14140 314 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 GAS2L1Q99501 681 aaPredicted RBP19.43■□□□□ 0.7
VPS28-205ENST00000526204 C7orf50Q9BRJ6 194 aaKnown RBP19.43■□□□□ 0.7
VPS28-205ENST00000526204 LRRN3Q9H3W5 708 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 A0A0A6YYJ9 748 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 A0A1W2PPK0 400 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 OR6C68A6NDL8 312 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 IFNA16P05015 189 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 ADH7P40394 386 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.43■□□□□ 0.7
VPS28-205ENST00000526204 WBP2NLQ6ICG8 309 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 ZNF527Q8NB42 609 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 OR6K6Q8NGW6 343 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 FAM174AQ8TBP5 190 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 YIPF5Q969M3 257 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 OR14A2Q96R54 314 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 LRRC61Q9BV99 259 aa19.43■□□□□ 0.7
VPS28-205ENST00000526204 C7orf66A4D0T2 115 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 ANKRD34BA5PLL1 514 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 ELOA3DA6NLF2 546 aaPredicted RBP19.42■□□□□ 0.7
VPS28-205ENST00000526204 GLCEO94923 617 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 ELOA3BQ3SY89 546 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 FAM71CQ8NEG0 241 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 ELOA3Q8NG57 546 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 LIPHQ8WWY8 451 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 MMABQ96EY8 250 aaPredicted RBP19.42■□□□□ 0.7
VPS28-205ENST00000526204 ZNF285Q96NJ3 590 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 MAP3K3Q99759 626 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 MED28Q9H204 178 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 COPS3Q9UNS2 423 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 A0A1B0GTQ1 180 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 A0A1W2PPC4 97 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 PDCD5O14737 125 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 CTDSPLO15194 276 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 GSTZ1O43708 216 aaPredicted RBP19.42■□□□□ 0.7
VPS28-205ENST00000526204 SELENOFO60613 162 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 APEHP13798 732 aaKnown RBP19.42■□□□□ 0.7
VPS28-205ENST00000526204 GLULP15104 373 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 CAPZBP47756 277 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 ERVK-25P63136 954 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 BCL2L15Q5TBC7 163 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 OR7G1Q8NGA0 311 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 ADAMTS14Q8WXS8 1223 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 SCMH1Q96GD3 660 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 HYLS1Q96M11 299 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 GPR174Q9BXC1 333 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 UBQLN4Q9NRR5 601 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 NUDT15Q9NV35 164 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 MRPL39Q9NYK5 338 aaKnown RBP19.42■□□□□ 0.7
VPS28-205ENST00000526204 PLCL2Q9UPR0 1127 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 SLC6A5Q9Y345 797 aa19.42■□□□□ 0.7
VPS28-205ENST00000526204 CPNE3O75131 537 aaKnown RBP19.41■□□□□ 0.7
VPS28-205ENST00000526204 HPGDP15428 266 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 EVI2BP34910 448 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 FASLGP48023 281 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 SRP9P49458 86 aaKnown RBP19.41■□□□□ 0.7
VPS28-205ENST00000526204 MAZP56270 477 aaKnown RBP19.41■□□□□ 0.7
VPS28-205ENST00000526204 UBE2NLQ5JXB2 153 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 LYPD4Q6UWN0 246 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 KCTD20Q7Z5Y7 419 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 GHDCQ8N2G8 530 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 ZNF671Q8TAW3 534 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 RPS4Y2Q8TD47 263 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 ZNRF4Q8WWF5 429 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 RASD2Q96D21 266 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 ZFP3Q96NJ6 502 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 PDCD1LG2Q9BQ51 273 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 UCK1Q9HA47 277 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 STMN3Q9NZ72 180 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 CLEC4AQ9UMR7 237 aa19.41■□□□□ 0.7
VPS28-205ENST00000526204 MRPS7Q9Y2R9 242 aaKnown RBP19.41■□□□□ 0.7
VPS28-205ENST00000526204 AK6Q9Y3D8 172 aaKnown RBP19.41■□□□□ 0.7
VPS28-205ENST00000526204 IGKV1D-42A0A075B6H8 117 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 ZNF780AO75290 641 aaPredicted RBP19.4■□□□□ 0.7
VPS28-205ENST00000526204 TCRBP04435 133 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 PROS1P07225 676 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms