RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 G6PDP11413 515 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 IMPDH2P12268 514 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 BMP4P12644 408 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ITGA2P17301 1181 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TCN1P20061 433 aaPredicted RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 DRD4P21917 467 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 EPHA3P29320 983 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 IL2RGP31785 369 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 APOBEC1P41238 236 aaKnown RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 MAGEA8P43361 318 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 IDH3AP50213 366 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 CLDN8P56748 225 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 PRPS1P60891 318 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 PHC1P78364 1004 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 BNIP2Q12982 314 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ZNF141Q15928 474 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SWI5Q1ZZU3 235 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SLC9B1Q4ZJI4 515 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 GPAT3Q53EU6 434 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 NXNQ6DKJ4 435 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ABLIM2Q6H8Q1 611 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 OR7E24Q6IFN5 339 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ZNF544Q6NX49 715 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 C12orf54Q6X4T0 127 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 THSD4Q6ZMP0 1018 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 MSANTD1Q6ZTZ1 278 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 EIF3MQ7L2H7 374 aaKnown RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 AAED1Q7RTV5 226 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 MAVSQ7Z434 540 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SPATA21Q7Z572 469 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 TMEM99Q8N816 258 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 VPS37AQ8NEZ2 397 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 OR4A15Q8NGL6 344 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 PIGXQ8TBF5 258 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TSPEARQ8WU66 669 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ST8SIA1Q92185 356 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TESCQ96BS2 214 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 COQ8BQ96D53 544 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SLC35G5Q96KT7 338 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 ZNF385AQ96PM9 386 aaKnown RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 ZBTB18Q99592 522 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 CCDC106Q9BWC9 280 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 PLA2G12AQ9BZM1 189 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 DPY30Q9C005 99 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 BPESC1Q9GZL8 116 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 NARFLQ9H6Q4 476 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SEC61A2Q9H9S3 476 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 NPHS2Q9NP85 383 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 SDR39U1Q9NRG7 319 aaPredicted RBP5.74□□□□□ -1.49
CD44-221ENST00000526000 AIG1Q9NVV5 245 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TMEM160Q9NX00 188 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TMEM181Q9P2C4 612 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 CHRNA9Q9UGM1 479 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 TMED7Q9Y3B3 224 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 PLCE1Q9P212 2302 aa5.74□□□□□ -1.49
CD44-221ENST00000526000 MXRA5Q9NR99 2828 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 IGKV3D-15A0A087WSY6 115 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 IGHV1-18A0A0C4DH31 117 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 PRAMEF27A3QJZ7 478 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 CCDC22O60826 627 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 STAMBPO95630 424 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 OR4A8P0C604 315 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 HNF1AP20823 631 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 TACR3P29371 465 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 PGM1P36871 562 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 SERPINF1P36955 418 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 NME5P56597 212 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 SNRPD2P62316 118 aaKnown RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 KCNJ10P78508 379 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 CEACAM7Q14002 265 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 CCNIQ14094 377 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 SQLEQ14534 574 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 PDK3Q15120 406 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 MAPRE2Q15555 327 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 OR7A5Q15622 319 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 TRIP10Q15642 601 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 ARHGAP11BQ3KRB8 267 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 OTUD3Q5T2D3 398 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 GKAP1Q5VSY0 366 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 ANXA8L1Q5VT79 327 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 TYW3Q6IPR3 259 aaKnown RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 ANKRD16Q6P6B7 361 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 KLHL24Q6TFL4 600 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 RINLQ6ZS11 566 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 PIGWQ7Z7B1 504 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 GPAT4Q86UL3 456 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 CARM1Q86X55 608 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 RIMKLAQ8IXN7 391 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 MIER2Q8N344 545 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 KDM8Q8N371 416 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 ANKFN1Q8N957 763 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 ZIC4Q8N9L1 334 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 OR8J2Q8NGG1 315 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 C10orf82Q8WW14 230 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 ROPN1LQ96C74 230 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 OR52B2Q96RD2 323 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 SNX18Q96RF0 628 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 CCT8L2Q96SF2 557 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms