RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GLYATQ6IB77 296 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 CASP12Q6UXS9 341 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 RRM2BQ7LG56 351 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TRPM8Q7Z2W7 1104 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 COMTD1Q86VU5 262 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM200AQ86VY9 491 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TUSC5Q8IXB3 177 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 DMRTC2Q8IXT2 367 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 FITM2Q8N6M3 262 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 RNF148Q8N7C7 305 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF610Q8N9Z0 462 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 STEAP2Q8NFT2 490 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR6S1Q8NH40 331 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 KISS1RQ969F8 398 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 POP5Q969H6 163 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF524Q96C55 264 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC41A3Q96GZ6 507 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 HSH2DQ96JZ2 352 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PRRC1Q96M27 445 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 NSMCE2Q96MF7 247 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 HS6ST2Q96MM7 605 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 DACH2Q96NX9 599 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 CDRT15Q96T59 188 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 USB1Q9BQ65 265 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PSD2Q9BQI7 771 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 MED18Q9BUE0 208 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 FNDC11Q9BVV2 318 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 HDHD5Q9BXW7 423 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC19A3Q9BZV2 496 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TRIM15Q9C019 465 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 NDEL1Q9GZM8 345 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PCDHAC1Q9H158 963 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 MUC13Q9H3R2 512 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 MCCC2Q9HCC0 563 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 NGBQ9NPG2 151 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 KRCC1Q9NPI7 259 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PLSCR4Q9NRQ2 329 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF226Q9NYT6 803 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 JKAMPQ9P055 326 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 UPB1Q9UBR1 384 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 EGFL7Q9UHF1 273 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PRPF19Q9UMS4 504 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 EDARQ9UNE0 448 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 USP22Q9UPT9 525 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 B3GALT5Q9Y2C3 310 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SNX13Q9Y5W8 968 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 NCKAP5O14513 1909 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 BAHCC1Q9P281 2608 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 EML6Q6ZMW3 1958 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF407Q9C0G0 2248 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 DOPEY1Q5JWR5 2465 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CIB4A0PJX0 185 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 SH3D21A4FU49 640 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 HTR3EA5X5Y0 456 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR6C65A6NJZ3 312 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 M0R082 166 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 KPNA4O00629 521 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ARPC2O15144 300 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 GYG2O15488 501 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TPST2O60704 377 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 NPIPB7O75200 414 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CNOT4O95628 575 aaKnown RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CGAP01215 116 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 NCK1P16333 377 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF43P17038 809 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 IGFBP2P18065 325 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TNFRSF1BP20333 461 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 GRPRP30550 384 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 UGT2B10P36537 528 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR1E2P47887 323 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR3A2P47893 321 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 RASSF2P50749 326 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 SMIM11AP58511 58 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 H3F3AP84243 136 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TGFBR3Q03167 851 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TLE4Q04727 773 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 PMS2P3Q13401 168 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC17A1Q14916 467 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TRAM2Q15035 370 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 DNAL1Q4LDG9 190 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 MTX3Q5HYI7 312 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 HIST2H2BCQ6DN03 193 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 KLHL24Q6TFL4 600 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TFAP2EQ6VUC0 442 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 Q6ZT83 130 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CBLL1Q75N03 491 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 H1FNTQ75WM6 255 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 SSX8Q7RTT4 187 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 AAED1Q7RTV5 226 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 NUFIP2Q7Z417 695 aaKnown RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 HDDC2Q7Z4H3 204 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 NANOGNBQ7Z5D8 188 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZGRF1Q86YA3 2104 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 RBM45Q8IUH3 476 aaKnown RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CCDC103Q8IW40 242 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 UEVLDQ8IX04 471 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CDK20Q8IZL9 346 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM99Q8N816 258 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms