RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CXCR1P25024 350 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 APEX1P27695 318 aaKnown RBP22.53■■□□□ 1.2
PVT1-219ENST00000523427 SELENOPP49908 381 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 RUNX1T1Q06455 604 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 ANKRD16Q6P6B7 361 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 ABHD12BQ7Z5M8 362 aaPredicted RBP22.53■■□□□ 1.2
PVT1-219ENST00000523427 RNF130Q86XS8 419 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 RFLNBQ8N5W9 214 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 NEURL3Q96EH8 262 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 SNX18Q96RF0 628 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 KATNB1Q9BVA0 655 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 AKTIPQ9H8T0 292 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 SEC61A2Q9H9S3 476 aa22.53■■□□□ 1.2
PVT1-219ENST00000523427 TMEFF2Q9UIK5 374 aaPredicted RBP22.53■■□□□ 1.2
PVT1-219ENST00000523427 CFAP73A6NFT4 308 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 LIPT2A6NK58 231 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 ZNF587BE7ETH6 402 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 HMGN4O00479 90 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 CECR9P0C854 216 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 IDH3GP51553 393 aaPredicted RBP22.52■■□□□ 1.2
PVT1-219ENST00000523427 NAAAQ02083 359 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 BNIP2Q12982 314 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 ANXA8L1Q5VT79 327 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 KIF18AQ8NI77 898 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 WDR60Q8WVS4 1066 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 SF3B5Q9BWJ5 86 aaKnown RBP22.52■■□□□ 1.2
PVT1-219ENST00000523427 PLK3Q9H4B4 646 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 OBP2BQ9NPH6 170 aa22.52■■□□□ 1.2
PVT1-219ENST00000523427 CHRM4P08173 479 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 UQCRBP14927 111 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 IL7RP16871 459 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 CALCRP30988 508 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 SERPINB5P36952 375 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 CHN2P52757 468 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 SPANXN4Q5MJ08 99 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 MRPL2Q5T653 305 aaKnown RBP22.51■■□□□ 1.19
PVT1-219ENST00000523427 AP1ARQ63HQ0 302 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 NIPAL3Q6P499 406 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 CADM2Q8N3J6 435 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 SVOPLQ8N434 492 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 BCL2L2Q92843 193 aaPredicted RBP22.51■■□□□ 1.19
PVT1-219ENST00000523427 SLC38A1Q9H2H9 487 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 ASIC5Q9NY37 505 aa22.51■■□□□ 1.19
PVT1-219ENST00000523427 AGAP5A6NIR3 686 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 AQP7P3A6NL99 342 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 hCG_2039718K7EN88 272 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 SNUPNO95149 360 aaKnown RBP22.5■■□□□ 1.19
PVT1-219ENST00000523427 GKN3PP0CG01 181 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 NME5P56597 212 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 EPS8Q12929 822 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 C1QTNF12Q5T7M4 302 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 C12orf54Q6X4T0 127 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 RINLQ6ZS11 566 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 LINGO2Q7L985 606 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 SPATA21Q7Z572 469 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 CMIPQ8IY22 773 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22.5■■□□□ 1.19
PVT1-219ENST00000523427 TAPBPLQ9BX59 468 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 OCEL1Q9H607 264 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 RLIMQ9NVW2 624 aa22.5■■□□□ 1.19
PVT1-219ENST00000523427 WDR91A4D1P6 747 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 ITM2AO43736 263 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 LILRA1O75019 489 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 UPK3AO75631 287 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 BPGMP07738 259 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 CELA3BP08861 270 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 CREB1P16220 341 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 THBS4P35443 961 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 PPOXP50336 477 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 CCNIQ14094 377 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 GNA13Q14344 377 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 CASP8Q14790 479 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 TRIP10Q15642 601 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 EFNB3Q15768 340 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 LINC01356Q8N9X3 169 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 PNPT1Q8TCS8 783 aaKnown RBP22.49■■□□□ 1.19
PVT1-219ENST00000523427 TRNT1Q96Q11 434 aaKnown RBP22.49■■□□□ 1.19
PVT1-219ENST00000523427 DYNLRB1Q9NP97 96 aa22.49■■□□□ 1.19
PVT1-219ENST00000523427 LYNX1G3V0Z9 82 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 PDE5AO76074 875 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 ERCC1P07992 297 aaPredicted RBP22.48■■□□□ 1.19
PVT1-219ENST00000523427 LYNX1P0DP58 116 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 NR2F1P10589 423 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 HGFACQ04756 655 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 CREB3L2Q70SY1 520 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 KDM8Q8N371 416 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 ZNF781Q8N8C0 355 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 PKNOX2Q96KN3 472 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 ADAM19Q9H013 955 aa22.48■■□□□ 1.19
PVT1-219ENST00000523427 MTHFD2LQ9H903 347 aaPredicted RBP22.48■■□□□ 1.19
PVT1-219ENST00000523427 IFNGR1P15260 489 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 NPR2P20594 1047 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 S100A3P33764 101 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 MAP2K6P52564 334 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 FAM174BQ3ZCQ3 159 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 PRAMEF8Q5VWM4 474 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 PRAMEF7Q5VXH5 474 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 LRRC74BQ6ZQY2 392 aa22.47■■□□□ 1.19
PVT1-219ENST00000523427 MYPOPQ86VE0 399 aaPredicted RBP22.47■■□□□ 1.19
PVT1-219ENST00000523427 NUDCD3Q8IVD9 361 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms