RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SLC35A2P78381 396 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 E2F1Q01094 437 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CAMK2DQ13557 499 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 FAM53BQ14153 422 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 ATXN7L3Q14CW9 347 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 PRAMEF9Q5VWM5 478 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 BCORP1Q8N888 145 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR52I1Q8NGK6 324 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CCDC32Q9BV29 185 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 NXF5Q9H1B4 397 aaKnown RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 NUFIP1Q9UHK0 495 aaKnown RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 NPFFR2Q9Y5X5 522 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 TRAV36DV7A0A075B6V5 113 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 ADAM23O75077 832 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 TNFSF8P32971 234 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 TIGD4Q8IY51 512 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR6Q1Q8NGQ2 317 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 CCNL2Q96S94 520 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 MUTYHQ9UIF7 546 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 CORINQ9Y5Q5 1042 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 TMEM269A0A1B0GVZ9 245 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 NCR1O76036 304 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 IGHG1P01857 330 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 TMEM225BP0DP42 221 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 GLP1RP43220 463 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 PITPNBP48739 271 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 MAN2A2P49641 1150 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 OCLNQ16625 522 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 SYT14P1Q58G82 188 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 GDPD1Q8N9F7 314 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC6A7Q99884 636 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC38A1Q9H2H9 487 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 INPP5EQ9NRR6 644 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 KLHL9Q9P2J3 617 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 LILRA5A6NI73 299 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 A6NLC8 198 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 HPGDSO60760 199 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 CDNFQ49AH0 187 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR1J4Q8NGS1 313 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF417Q8TAU3 575 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 HAVCR1Q96D42 359 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 ULBP2Q9BZM5 246 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 FANCFQ9NPI8 374 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 FBXL3Q9UKT7 428 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 DIMT1Q9UNQ2 313 aaKnown RBP12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 POLHQ9Y253 713 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 MTCH2Q9Y6C9 303 aa12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
PCDHGB1-201ENST00000523390 CDHR4A6H8M9 788 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 CLUP10909 449 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ICAM2P13598 275 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC2A5P22732 501 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 EMP3P54852 163 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 PSMA6P60900 246 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 DUSP8Q13202 625 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MRPL49Q13405 166 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ABHD12BQ7Z5M8 362 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 RPS19BP1Q86WX3 136 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SMRP1Q8NCR6 262 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 UCN3Q969E3 161 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 POTEKPQ9BYX7 375 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 PCDHB16Q9NRJ7 776 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 VSX1Q9NZR4 365 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 WNT16Q9UBV4 365 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MRPS2Q9Y399 296 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MEGF11A6BM72 1044 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 H0YIG0 161 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SWI5Q1ZZU3 235 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 GLYR1Q49A26 553 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 AWAT2Q6E213 333 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 VN1R4Q7Z5H5 301 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 CAMKMTQ7Z624 323 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 IQCF2Q8IXL9 164 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 NEDD4LQ96PU5 975 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 HHLA2Q9UM44 414 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 A0A0X1KG70 313 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF593O00488 134 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 CSO75390 466 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 HTR1FP30939 366 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 NR4A2P43354 598 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 PPICP45877 212 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 UBE2NP61088 152 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 P2RY14Q15391 338 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ESX1Q8N693 406 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 NT5CQ8TCD5 201 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 GHSRQ92847 366 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 FAM46BQ96A09 425 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 HINT3Q9NQE9 182 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MCTS1Q9ULC4 181 aaKnown RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MIA3Q5JRA6 1907 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 PSME4Q14997 1843 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 DOK2O60496 412 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms