RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 C4orf36Q96KX1 117 aa2.15□□□□□ -2.07
SKP1-207ENST00000520417 SLC6A7Q99884 636 aa2.15□□□□□ -2.07
SKP1-207ENST00000520417 LAMP5Q9UJQ1 280 aa2.15□□□□□ -2.07
SKP1-207ENST00000520417 OR10H1Q9Y4A9 318 aa2.15□□□□□ -2.07
SKP1-207ENST00000520417 YTHDF2Q9Y5A9 579 aaKnown RBP2.15□□□□□ -2.07
SKP1-207ENST00000520417 AP1M2Q9Y6Q5 423 aa2.15□□□□□ -2.07
SKP1-207ENST00000520417 PCM1Q15154 2024 aa2.15□□□□□ -2.07
SKP1-207ENST00000520417 VSTM2BA6NLU5 285 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 E9PBE3 544 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 G3V4G9 280 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 K7EPI3 171 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 OR1F1O43749 312 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 NOL3O60936 208 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 SS18L1O75177 396 aaPredicted RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 LGI1O95970 557 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 PTMAP06454 111 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 HEXBP07686 556 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 DESP17661 470 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 PGCP20142 388 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 NPY1RP25929 384 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 HPCAL1P37235 193 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 KPNA2P52292 529 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 AP3M2P53677 418 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 CNTN2Q02246 1040 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 TATDN3Q17R31 274 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 NANOGP8Q6NSW7 305 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 SYT10Q6XYQ8 523 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 GRAMD2AQ8IUY3 354 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 LRRC43Q8N309 656 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 DHRSXQ8N5I4 330 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 NPBQ8NG41 125 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 OR6C4Q8NGE1 309 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 OR5L2Q8NGL0 311 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 CTNNBL1Q8WYA6 563 aaPredicted RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 RPL3LQ92901 407 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 TIMD4Q96H15 378 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 C12orf66Q96MD2 445 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 TAAR1Q96RJ0 339 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 HIST1H4GQ99525 98 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 RIT2Q99578 217 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 NAT10Q9H0A0 1025 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 RIBC2Q9H4K1 309 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 LIN28AQ9H9Z2 209 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 PALMDQ9NP74 551 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 SLC35D1Q9NTN3 355 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 OPN4Q9UHM6 478 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 ISY1Q9ULR0 285 aaKnown RBP2.14□□□□□ -2.07
SKP1-207ENST00000520417 FRMPD4Q14CM0 1322 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 CLSPNQ9HAW4 1339 aa2.14□□□□□ -2.07
SKP1-207ENST00000520417 IGHV2-70DA0A0C4DH43 119 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 A0A0G2JN53 185 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 KIR2DS1A0A191URI9 304 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 ZSCAN12O43309 604 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 PRKYO43930 277 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 PEX11AO75192 247 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 NEBLO76041 1014 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 H2BFMP0C1H6 154 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 TPSB2P20231 275 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 YWHABP31946 246 aaKnown RBP2.13□□□□□ -2.07
SKP1-207ENST00000520417 CD80P33681 288 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 SLC26A3P40879 764 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 VDAC2P45880 294 aaPredicted RBP2.13□□□□□ -2.07
SKP1-207ENST00000520417 PRKXP51817 358 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 MXD4Q14582 209 aaPredicted RBP2.13□□□□□ -2.07
SKP1-207ENST00000520417 KIR2DS1Q14954 304 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 TPSAB1Q15661 275 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 TRIM16LQ309B1 348 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 SLC36A3Q495N2 470 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 LRP11Q86VZ4 500 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 MYOCDQ8IZQ8 938 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 SVOPLQ8N434 492 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 CLDN19Q8N6F1 224 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 KIR3DL3Q8N743 410 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 OR10A7Q8NGE5 316 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 SYNPRQ8TBG9 265 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 DTX3LQ8TDB6 740 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 SPRYD4Q8WW59 207 aaPredicted RBP2.13□□□□□ -2.07
SKP1-207ENST00000520417 ST8SIA1Q92185 356 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 THRSPQ92748 146 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 TMEM117Q9H0C3 514 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 CLMPQ9H6B4 373 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 MEAF6Q9HAF1 191 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 TMOD2Q9NZR1 351 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 HEBP2Q9Y5Z4 205 aa2.13□□□□□ -2.07
SKP1-207ENST00000520417 ATP10DQ9P241 1426 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 HIP1O00291 1037 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 BET1O15155 118 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 BCAS1O75363 584 aaPredicted RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 CYP2B6P20813 491 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 NT5EP21589 574 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 DRD5P21918 477 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 FGF9P31371 208 aaPredicted RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 FMO3P31513 532 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 CHI3L1P36222 383 aaPredicted RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 LEPP41159 167 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 ACAA2P42765 397 aaKnown RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 NSUN5P1Q3KNT7 163 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 FRMPD2BQ6IN97 320 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 MOB3BQ86TA1 216 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms