RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SERPINI2O75830 405 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 GIMD1P0DJR0 217 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 ELK1P19419 428 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 EGR4Q05215 589 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 LGALS3BPQ08380 585 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 PTCRAQ6ISU1 281 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-213ENST00000520267 LYPD4Q6UWN0 246 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 OIT3Q8WWZ8 545 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 WNT16Q9UBV4 365 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 FER1L5A0AVI2 2057 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 TEX13CA0A0J9YWL9 993 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 A0A1B0GVT2 93 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 FAM25AB3EWG3 89 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 FAM25CB3EWG5 89 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 FAM25GB3EWG6 89 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 TFECO14948 347 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-213ENST00000520267 GMFGO60234 142 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 SLC19A2O60779 497 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 CAPZA2P47755 286 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 LTBQ06643 244 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 ISXQ2M1V0 245 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 IL20RBQ6UXL0 311 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 C9orf40Q8IXQ3 194 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 GPR135Q8IZ08 494 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 CARFQ8N187 725 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 SHDQ96IW2 340 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 Q96M85 177 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 PRO3102Q9H379 93 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 PAIP2BQ9ULR5 123 aaKnown RBP23.48■■□□□ 1.35
COL13A1-213ENST00000520267 OGG1O15527 345 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 GLB1P16278 677 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 MYL9P24844 172 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 THBS2P35442 1172 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 AFF3P51826 1226 aaKnown RBP23.47■■□□□ 1.35
COL13A1-213ENST00000520267 EBPQ15125 230 aaKnown RBP23.47■■□□□ 1.35
COL13A1-213ENST00000520267 CDONQ4KMG0 1287 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 SYS1Q8N2H4 156 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 SLC41A2Q96JW4 573 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 DEPDC7Q96QD5 511 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 NPAP1Q9NZP6 1156 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 ADAM30Q9UKF2 790 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 HIF3AQ9Y2N7 669 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 C17orf51A8MQB3 221 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 IDH3BO43837 385 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 PTBP1P26599 531 aaKnown RBP eCLIP23.47■■□□□ 1.35
COL13A1-213ENST00000520267 CDKN2AP42771 156 aaKnown RBP23.47■■□□□ 1.35
COL13A1-213ENST00000520267 NSDHLQ15738 373 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 LEG1Q6P5S2 330 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 LRRC75AQ8NAA5 344 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 OR6K6Q8NGW6 343 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF563Q8TA94 476 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 LIPHQ8WWY8 451 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 MMP25Q9NPA2 562 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 NANSQ9NR45 359 aa23.47■■□□□ 1.35
COL13A1-213ENST00000520267 MRTO4Q9UKD2 239 aaKnown RBP23.47■■□□□ 1.35
COL13A1-213ENST00000520267 TNRC18O15417 2968 aaPredicted RBP23.46■■□□□ 1.35
COL13A1-213ENST00000520267 A0A0G2JK05 382 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 AGRPO00253 132 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 ATP6V1G1O75348 118 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 IGF2P01344 180 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 HLA-DQB1P01920 261 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 NR0B1P51843 470 aaKnown RBP23.46■■□□□ 1.35
COL13A1-213ENST00000520267 ACTA2P62736 377 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 ACTG2P63267 376 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 SLC35D3Q5M8T2 416 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 TRIQKQ629K1 86 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF544Q6NX49 715 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 SNX33Q8WV41 574 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 DPYSL5Q9BPU6 564 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 SEMA5BQ9P283 1151 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 RASD1Q9Y272 281 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 RP1P56715 2156 aa23.46■■□□□ 1.35
COL13A1-213ENST00000520267 FAM171A2A8MVW0 826 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 CCNKO75909 580 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 TACR3P29371 465 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 GBX2P52951 348 aaPredicted RBP23.45■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF117Q03924 483 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 DMWDQ09019 674 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 RIN1Q13671 783 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 CDK5R1Q15078 307 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 KCNJ8Q15842 424 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 ARHGAP40Q5TG30 622 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 SFXN4Q6P4A7 337 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 TPRA1Q86W33 373 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 MS4A15Q8N5U1 240 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 KTI12Q96EK9 354 aaPredicted RBP23.45■■□□□ 1.35
COL13A1-213ENST00000520267 LAT2Q9GZY6 243 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 NCDNQ9UBB6 729 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 EXTL2Q9UBQ6 330 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 GNG8Q9UK08 70 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 POU2F3Q9UKI9 436 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 PCDHGB7Q9Y5F8 929 aa23.45■■□□□ 1.35
COL13A1-213ENST00000520267 ADAMTS20P59510 1910 aa23.45■■□□□ 1.34
COL13A1-213ENST00000520267 HTR3EA5X5Y0 456 aa23.45■■□□□ 1.34
COL13A1-213ENST00000520267 KIR2DL3P43628 341 aa23.45■■□□□ 1.34
COL13A1-213ENST00000520267 GDI2P50395 445 aaKnown RBP23.45■■□□□ 1.34
COL13A1-213ENST00000520267 FAM122BQ7Z309 247 aa23.45■■□□□ 1.34
COL13A1-213ENST00000520267 RDH10Q8IZV5 341 aa23.45■■□□□ 1.34
COL13A1-213ENST00000520267 HLA-CQ95604 372 aa23.45■■□□□ 1.34
COL13A1-213ENST00000520267 SMIM19Q96E16 107 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms