RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 CLOCKO15516 846 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 SIAH2O43255 324 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 MFN2O95140 757 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 THBDP07204 575 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 PNMTP11086 282 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 NQO1P15559 274 aaKnown RBP12.54□□□□□ -0.4
VEGFA-221ENST00000520265 GGT1P19440 569 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 IGHV1-2P23083 117 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 HOXC12P31275 282 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 PCYT1AP49585 367 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 PDK3Q15120 406 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 OR1Q1Q15612 314 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 VMACQ2NL98 169 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 LRRC23Q53EV4 343 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-221ENST00000520265 FBXW9Q5XUX1 488 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 ULK3Q6PHR2 472 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 C22orf34Q6ZV56 151 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 AAED1Q7RTV5 226 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 CPLX4Q7Z7G2 160 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 OR8J3Q8NGG0 315 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 STK35Q8TDR2 534 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 PROX1Q92786 737 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 NINJ1Q92982 152 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 SLC38A4Q969I6 547 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 KTI12Q96EK9 354 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-221ENST00000520265 SLC47A1Q96FL8 570 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 ZNF317Q96PQ6 595 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-221ENST00000520265 NGBQ9NPG2 151 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 PARPBPQ9NWS1 579 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 ASB6Q9NWX5 421 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 FLVCR1Q9Y5Y0 555 aa12.54□□□□□ -0.4
VEGFA-221ENST00000520265 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 AQP7P3A6NL99 342 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 TMEM229AB2RXF0 380 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 SLC16A1P53985 500 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 SEC24CP53992 1094 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 NR1H2P55055 460 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 GNGT1P63211 74 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 C1DQ13901 141 aaKnown RBP12.53□□□□□ -0.4
VEGFA-221ENST00000520265 PPA1Q15181 289 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 TAB1Q15750 504 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 DUSP7Q16829 419 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 COQ5Q5HYK3 327 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 NET1Q7Z628 596 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-221ENST00000520265 OR52N5Q8NH56 324 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 TAMM41Q96BW9 452 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 EPYCQ99645 322 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 CCL19Q99731 98 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
VEGFA-221ENST00000520265 PDZD2O15018 2839 aa12.52□□□□□ -0.4
VEGFA-221ENST00000520265 TRAV36DV7A0A075B6V5 113 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 A0A1W2PPR1 153 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 A0A1W2PR80 420 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 FXYD1O00168 92 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 SLC22A2O15244 555 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 SERPINI2O75830 405 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 CD247P20963 164 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 NUDT2P50583 147 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 GYS2P54840 703 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.41
VEGFA-221ENST00000520265 H3F3AP84243 136 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 SLC17A1Q14916 467 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 NIPAL3Q6P499 406 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 ERICH5Q6P6B1 374 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 DEF8Q6ZN54 512 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 ZNF704Q6ZNC4 412 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-221ENST00000520265 KDM8Q8N371 416 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 LSMEM1Q8N8F7 131 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 MFSD8Q8NHS3 518 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 RASSF5Q8WWW0 418 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 ZNF385AQ96PM9 386 aaKnown RBP12.52□□□□□ -0.41
VEGFA-221ENST00000520265 ASPNQ9BXN1 380 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 OR10A4Q9H209 315 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 ESRP2Q9H6T0 727 aaKnown RBP12.52□□□□□ -0.41
VEGFA-221ENST00000520265 PRDM4Q9UKN5 801 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 CCDC168Q8NDH2 2452 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
VEGFA-221ENST00000520265 SPG11Q96JI7 2443 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 A0A0B4J2E0 115 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 A0A1B0GX12 115 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 M0R082 166 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 KPNA4O00629 521 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-221ENST00000520265 GSTA4O15217 222 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 OR2T1O43869 369 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 LGI1O95970 557 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 NPPAP01160 153 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 CD3EP07766 207 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 COX4I1P13073 169 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 ZNF43P17038 809 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 TNFRSF1BP20333 461 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 GRPRP30550 384 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 CDH12P55289 794 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
VEGFA-221ENST00000520265 ENTPD8Q5MY95 495 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms