RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF30P17039 623 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF10P21506 573 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PCMT1P22061 227 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 LMO2P25791 158 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CD40LGP29965 261 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 HSPA1LP34931 641 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CTNNB1P35222 781 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPL22P35268 128 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ETV5P41161 510 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ETV6P41212 452 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MAGEA3P43357 314 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MAGEA12P43365 314 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC1A6P48664 564 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACOT2P49753 483 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINH1P50454 418 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PLA2G16P53816 162 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 NME5P56597 212 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 NLRP11P59045 1033 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MYL6P60660 151 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 POLR2GP62487 172 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPS22P82650 360 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 OGDHQ02218 1023 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 RAD51Q06609 339 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MGAT3Q09327 533 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 COX10Q12887 443 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 RIGQ13278 110 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 NAB1Q13506 487 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TFDP2Q14188 446 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCNJ11Q14654 390 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MEF2DQ14814 521 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PDK2Q15119 407 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPHARQ15513 63 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 HADHQ16836 314 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ECSCRQ19T08 205 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 POM121L1PQ3SYA9 428 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PARP15Q460N3 678 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 HIGD2BQ4VC39 106 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TCHHL1Q5QJ38 904 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MUC21Q5SSG8 566 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ATAD3CQ5T2N8 411 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 LGSNQ5TDP6 509 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 C1orf189Q5VU69 101 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 GPR107Q5VW38 600 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ANKRD22Q5VYY1 191 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 LAMTOR1Q6IAA8 161 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 EPGNQ6UW88 154 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 USP50Q70EL3 339 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 AKAP14Q86UN6 197 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC22A16Q86VW1 577 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCNMB4Q86W47 210 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNX32Q86XE0 403 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 UNC45BQ8IWX7 931 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 UBQLNLQ8IYU4 475 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TBC1D21Q8IYX1 336 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 LINC00518Q8N0U6 118 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PGAM4Q8N0Y7 254 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PDIK1LQ8N165 341 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRIML2Q8N7C3 387 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 POM121L12Q8N7R1 296 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNX31Q8N9S9 440 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CLEC1AQ8NC01 280 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR5B17Q8NGF7 314 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR1B1Q8NGR6 318 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR2T34Q8NGX1 318 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PSMA8Q8TAA3 256 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 GPR148Q8TDV2 347 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SSC4DQ8WTU2 575 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PDCD6IPQ8WUM4 868 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PCNPQ8WW12 178 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 S100ZQ8WXG8 99 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PTP4A1Q93096 173 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TOMM40LQ969M1 308 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MARC2Q969Z3 335 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 NABP1Q96AH0 204 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAF2Q96CS3 445 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CMTM5Q96DZ9 223 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CEP19Q96LK0 163 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 OPALINQ96PE5 141 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TAAR6Q96RI8 345 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SDHCQ99643 169 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SSX3Q99909 188 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 C11orf70Q9BRQ4 267 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 UQCC2Q9BRT2 126 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPP25Q9BUL9 199 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 NUSAP1Q9BXS6 441 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TEX13BQ9BXU2 312 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPL9Q9BYD2 267 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACPTQ9BZG2 426 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLIRPQ9GZT3 109 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ASB7Q9H672 318 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 GNB4Q9HAV0 340 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ANKHQ9HCJ1 492 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZFP14Q9HCL3 533 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TIGARQ9NQ88 270 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 C12orf4Q9NQ89 552 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 AGPAT4Q9NRZ5 378 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 FBXL12Q9NXK8 326 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 RBAKQ9NYW8 714 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MOSPD1Q9UJG1 213 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TSPAN16Q9UKR8 245 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms