RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 OR2T1O43869 369 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 FOXD2O60548 495 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 MT-CO3P00414 261 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 CD14P08571 375 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 SBK2P0C263 348 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 ICAM2P13598 275 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 PRKCAP17252 672 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 CD53P19397 219 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 GALP22466 123 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 FKBP2P26885 142 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 ITPKBP27987 946 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 APOBEC1P41238 236 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 SERPINB10P48595 397 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 CLK1P49759 484 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 SLC25A1P53007 311 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 MLLT10P55197 1068 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 FBXW4P57775 412 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 ACTC1P68032 377 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 ACTA1P68133 377 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 LGALS3BPQ08380 585 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 CHAF1BQ13112 559 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 DOC2BQ14184 412 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 CRMP1Q14194 572 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 SSPNQ14714 243 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 MFSD13AQ14CX5 517 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 SF3A2Q15428 464 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 TOMM34Q15785 309 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 CSRP2Q16527 193 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.6□□□□□ -1.19
RNF4-220ENST00000513578 COL28A1Q2UY09 1125 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 FAM69AQ5T7M9 428 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 LCN1P1Q5VSP4 162 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 GPR139Q6DWJ6 353 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 FAM199XQ6PEV8 388 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 OPN5Q6U736 354 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 MAMDC2Q7Z304 686 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 FAM122BQ7Z309 247 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 PHC2Q8IXK0 858 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 KLHL36Q8N4N3 616 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 ACBD7Q8N6N7 88 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 LRRC17Q8N6Y2 441 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 POMGNT2Q8NAT1 580 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 BBS1Q8NFJ9 593 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 OR11G2Q8NGC1 345 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 PMEPA1Q969W9 287 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 C8orf44Q96CB5 159 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 SPACA9Q96E40 222 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 ZHX1-C8orf76Q96EF9 292 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 SH3YL1Q96HL8 342 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 ERMAPQ96PL5 475 aaPredicted RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 DEPDC7Q96QD5 511 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 RASL10BQ96S79 203 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 COQ7Q99807 217 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 MESP1Q9BRJ9 268 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 EDEM2Q9BV94 578 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 POTEKPQ9BYX7 375 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 NXF2Q9GZY0 626 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 ERVK13-1Q9NX77 482 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 CCDC59Q9P031 241 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 IL20RAQ9UHF4 553 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 STUB1Q9UNE7 303 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 MOKQ9UQ07 419 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 YARS2Q9Y2Z4 477 aaKnown RBP7.6□□□□□ -1.19
RNF4-220ENST00000513578 PCDHGB7Q9Y5F8 929 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 IER3IP1Q9Y5U9 82 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 PCNX2A6NKB5 2137 aa7.6□□□□□ -1.19
RNF4-220ENST00000513578 DNAH14Q0VDD8 3507 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 TMEM72A0PK05 275 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 NPIPB13A6NJU9 1138 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 FAM183AA6NL82 134 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 NPIPB4C9JG80 1138 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 FTCDNL1E5RQL4 147 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 GNB5O14775 395 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SUSD5O60279 629 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SLC25A12O75746 678 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 OR2J2O76002 312 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 DXOO77932 396 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 HPP00738 406 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 IGHMP01871 453 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 HIST1H2ABP04908 130 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 HIST1H1CP16403 213 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 PTNP21246 168 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 PSMA1P25786 263 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 NOS3P29474 1203 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SDHAP31040 664 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 IDUAP35475 653 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 RPL4P36578 427 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 DIO1P49895 249 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 VBP1P61758 197 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 NCS1P62166 190 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 ZP4Q12836 540 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SGCBQ16585 318 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 BTBD16Q32M84 506 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 ZNF829Q3KNS6 432 aaPredicted RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 ALG10Q5BKT4 473 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SLC35F1Q5T1Q4 408 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 TMEM164Q5U3C3 297 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 H3F3CQ6NXT2 135 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 CD200R1LQ6Q8B3 271 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 PAQR6Q6TCH4 344 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms