RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OR10G9Q8NGN4 311 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 TMEM186Q96B77 213 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 TM4SF19Q96DZ7 209 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 RBMXL1Q96E39 390 aaKnown RBP0.9□□□□□ -2.27
PDGFC-208ENST00000512711 NSMCE2Q96MF7 247 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF416Q9BWM5 594 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 ATG10Q9H0Y0 220 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 RNF167Q9H6Y7 350 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 ACTR8Q9H981 624 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 FOLH1BQ9HBA9 442 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 NGBQ9NPG2 151 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF586Q9NXT0 402 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 MTRRQ9UBK8 725 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 PCYOX1Q9UHG3 505 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 STAP1Q9ULZ2 295 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 SLC25A15Q9Y619 301 aa0.9□□□□□ -2.27
PDGFC-208ENST00000512711 MN1Q10571 1320 aaPredicted RBP0.89□□□□□ -2.27
PDGFC-208ENST00000512711 SH3TC1Q8TE82 1336 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 TNS2Q63HR2 1409 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 CARMIL3Q8ND23 1372 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 A0A0U1RQV5 110 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 A0A1B0GVX0 72 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 RS1O15537 224 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 BCAS2O75934 225 aaPredicted RBP0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ADCY5O95622 1261 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 MBD3O95983 291 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 PPIAL4GP0DN37 164 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 TPSB2P20231 275 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 NPR2P20594 1047 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 CNR1P21554 472 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 PAICSP22234 425 aaKnown RBP0.89□□□□□ -2.27
PDGFC-208ENST00000512711 COL8A2P25067 703 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 GLP1RP43220 463 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 HMGCS1Q01581 520 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 TPSAB1Q15661 275 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ATP6AP1Q15904 470 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 TRIM16LQ309B1 348 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 COX19Q49B96 90 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 PARP10Q53GL7 1025 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 VAX1Q5SQQ9 334 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF684Q5T5D7 378 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ETFRF1Q6IPR1 90 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 C1orf94Q6P1W5 598 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 LYPD2Q6UXB3 125 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 C19orf35Q6ZS72 473 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 TMEM17Q86X19 198 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 OR4K14Q8NGD5 310 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 OR56B1Q8NGI3 324 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 DNAJC19Q96DA6 116 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 CMTM7Q96FZ5 175 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 TMEM246Q9BRR3 403 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 DEFB127Q9H1M4 99 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 SMYD3Q9H7B4 428 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ECT2Q9H8V3 914 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 SIAEQ9HAT2 523 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 POLD4Q9HCU8 107 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 SLCO1B3Q9NPD5 702 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF355PQ9NSJ1 428 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 ARGLU1Q9NWB6 273 aaPredicted RBP0.89□□□□□ -2.27
PDGFC-208ENST00000512711 QPCTLQ9NXS2 382 aa0.89□□□□□ -2.27
PDGFC-208ENST00000512711 F11RQ9Y624 299 aaKnown RBP0.89□□□□□ -2.27
PDGFC-208ENST00000512711 DOCK8Q8NF50 2099 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 CARMIL1Q5VZK9 1371 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 NSG1A0A0A6YYJ2 146 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 RBMY1BA6NDE4 496 aaKnown RBP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 RBMY1EA6NEQ0 496 aaKnown RBP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 A8MUU9 505 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 TOM1L1O75674 476 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SRP72O76094 671 aaKnown RBP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 RBMY1DP0C7P1 496 aaKnown RBP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 LINC00869P0C866 280 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 RBMY1A1P0DJD3 496 aaKnown RBP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 FGF9P31371 208 aaPredicted RBP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SLC26A3P40879 764 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 KIR3DL2P43630 455 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 UBE2AP49459 152 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SPIN3Q5JUX0 258 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 OR2G6Q5TZ20 316 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 FBXW9Q5XUX1 488 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 LCN12Q6JVE5 192 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SLC26A11Q86WA9 606 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 ELMOD2Q8IZ81 293 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 BCORP1Q8N888 145 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 ATP6V0D2Q8N8Y2 350 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 CCDC54Q8NEL0 328 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 RAET1EQ8TD07 263 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 NEURL3Q96EH8 262 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 PAGE5Q96GU1 130 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 C12orf66Q96MD2 445 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SRMSQ9H3Y6 488 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 AATFQ9NY61 560 aaKnown RBP eCLIP0.88□□□□□ -2.27
PDGFC-208ENST00000512711 HOXC10Q9NYD6 342 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SIGLEC8Q9NYZ4 499 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SPASTQ9UBP0 616 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SEC16AO15027 2179 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 SHROOM3Q8TF72 1996 aa0.88□□□□□ -2.27
PDGFC-208ENST00000512711 A0A1W2PP18 115 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 FAM230AA0A1W2PPH8 454 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 G3V4G9 280 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 PEX7O00628 323 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms