RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 DNAJA3Q96EY1 480 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 SMIM10Q96HG1 83 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 SEMA4CQ9C0C4 833 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 ARHGEF17Q96PE2 2063 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 A0A1B0GTH9 108 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 OR6C68A6NDL8 312 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 ATP1B1P05026 303 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 NANOS3P60323 173 aaKnown RBP8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 FHL1Q13642 323 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 DEFB110Q30KQ9 67 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 TCTE1Q5JU00 501 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 C1orf53Q5VUE5 145 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 HACD4Q5VWC8 232 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 FCRL6Q6DN72 434 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 GLRX5Q86SX6 157 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 TEX19Q8NA77 164 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 TRPV4Q9HBA0 871 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 HAO2Q9NYQ3 351 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 KLF15Q9UIH9 416 aa8.5□□□□□ -1.05
LIMCH1-215ENST00000512632 URADA6NGE7 173 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PRR19A6NJB7 356 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 G3V3Q6 166 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 HRKO00198 91 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 OR7A10O76100 309 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 NDUFB2O95178 105 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PRKACBP22694 351 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 DCTDP32321 178 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RPS27P42677 84 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ACAA2P42765 397 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PRICKLE4Q2TBC4 344 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 OTPQ5XKR4 325 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 FAM199XQ6PEV8 388 aaPredicted RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 YAF2Q8IY57 180 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 CAMKVQ8NCB2 501 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 OR8K3Q8NH51 312 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 NT5CQ8TCD5 201 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RERGQ96A58 199 aaPredicted RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 GFI1Q99684 422 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 KXD1Q9BQD3 176 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RPP25Q9BUL9 199 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 LIN7BQ9HAP6 207 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ANKRD10Q9NXR5 420 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 HCN3Q9P1Z3 774 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PILRAQ9UKJ1 303 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 IFITM5A6NNB3 132 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 B8ZZF3 427 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 HCRTR1O43613 425 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 FMO6PO60774 539 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ZFPL1O95159 310 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 IGKV1D-16P01601 117 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 APODP05090 189 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 CTSBP07858 339 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 LSSP48449 732 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PGDP52209 483 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 DYRK1AQ13627 763 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ZNF776Q68DI1 518 aaPredicted RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RPL22L1Q6P5R6 122 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 C10orf53Q8N6V4 93 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 FRMD1Q8N878 549 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 GATSQ8NAP1 163 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 BADQ92934 168 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RELTQ969Z4 430 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SLC25A38Q96DW6 304 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 TM4SF19Q96DZ7 209 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ELMOD3Q96FG2 381 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 CD93Q9NPY3 652 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ACTR10Q9NZ32 417 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ZNF69Q9UC07 566 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 CHRNA9Q9UGM1 479 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SEC16AO15027 2179 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PRR32B1ATL7 298 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 BLOC1S5-TXNDC5H3BN57 136 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ADH1BP00325 375 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 OR8G3PP0DMU2 310 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ERV3-1Q14264 604 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 AANATQ16613 207 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 IDO2Q6ZQW0 420 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RTL10Q7L3V2 364 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 FGD2Q7Z6J4 655 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SLC2A12Q8TD20 617 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SLC22A18Q96BI1 424 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SFXN2Q96NB2 322 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 GSX2Q9BZM3 304 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ACTR6Q9GZN1 396 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 LMAN2LQ9H0V9 348 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 NOX3Q9HBY0 568 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 CA10Q9NS85 328 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 HEBP2Q9Y5Z4 205 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SPACA6W5XKT8 324 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 RDH16O75452 317 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 PROS1P07225 676 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 DIO1P49895 249 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 MGAT2Q10469 447 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 POU4F2Q12837 409 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 GPR18Q14330 331 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 OPCMLQ14982 345 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 ABHD13Q7L211 337 aa8.49□□□□□ -1.05
LIMCH1-215ENST00000512632 SLITRK4Q8IW52 837 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms