RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PRSS44E7EML9 344 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZNF254O75437 659 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 C4BPAP04003 597 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 SLC35E2BP0CK96 405 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 RPA2P15927 270 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 CHATP28329 748 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PTGS2P35354 604 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ARR3P36575 388 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PPP1CCP36873 323 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 GPR12P47775 334 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 FGFBP1Q14512 234 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PRAMEF5Q5TYX0 476 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PRAMEF6Q5VXH4 476 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 SYPL2Q5VXT5 272 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 TCTE3Q8IZS6 198 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 NOA1Q8NC60 698 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 GNRHR2Q96P88 292 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PIGLQ9Y2B2 252 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 LAMC1P11047 1609 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZNF749O43361 778 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZNF207O43670 478 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 SRPX2O60687 465 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 FAM155BO75949 473 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PENKP01210 267 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 TFP02787 698 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TACR1P25103 407 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ITGB7P26010 798 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TIA1P31483 386 aaKnown RBP eCLIP8.32□□□□□ -1.08
VCAN-208ENST00000512590 ECI1P42126 302 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 CORO7P57737 925 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 BPIFB3P59826 476 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 SLC35B1P78383 322 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 LTBQ06643 244 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 OR2T5Q6IEZ7 315 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZNF529Q6P280 563 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 MFSD6LQ8IWD5 586 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 SUMF1Q8NBK3 374 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 OR52E1Q8NGJ3 308 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 OR2T29Q8NH02 315 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ASB5Q8WWX0 329 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TFAP2CQ92754 450 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 CPNE4Q96A23 557 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 SLAMF9Q96A28 289 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ARSGQ96EG1 525 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZNF419Q96HQ0 510 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 FAXDC2Q96IV6 333 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 LRRC3Q9BY71 257 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 SLC38A1Q9H2H9 487 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 SYNPO2LQ9H987 977 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ABCC3O15438 1527 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 MYADML2A6NDP7 307 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 DLGAP1O14490 977 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 NDUFB2O95178 105 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TXNDC12O95881 172 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 RBP4P02753 201 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 IMPDH1P20839 514 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 EPHA2P29317 976 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ACSM5Q6NUN0 579 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 NHLRC2Q8NBF2 726 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 OR7G2Q8NG99 324 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZNF431Q8TF32 576 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 KCNK12Q9HB15 430 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 LPAR2Q9HBW0 351 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 RNF150Q9ULK6 438 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 H3BSA7 217 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 GCGP01275 180 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 FUT1P19526 365 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SMAGPQ0VAQ4 97 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 MEP1BQ16820 701 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 GSG1Q2KHT4 349 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 RNFT1Q5M7Z0 435 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 WIPI1Q5MNZ9 446 aaPredicted RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 PXDC1Q5TGL8 231 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ETFBKMTQ8IXQ9 262 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 PNPLA1Q8N8W4 532 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OR52N5Q8NH56 324 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 C12orf43Q96C57 262 aaKnown RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 HYLS1Q96M11 299 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 FZD9O00144 591 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 FAM157BP0CG42 384 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 CEACAM3P40198 252 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 MFAP5Q13361 173 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OGFOD3Q6PK18 319 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SBSNQ6UWP8 590 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 MRPL43Q8N983 215 aaKnown RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 SSC4DQ8WTU2 575 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SECTM1Q8WVN6 248 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 REEP6Q96HR9 211 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 INTS14Q96SY0 518 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 A0A1W2PRD5 423 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 A0A1W2PRF3 423 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 A0A1W2PRM7 423 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 HSD17B6O14756 317 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms