RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 LRGUKQ96M69 825 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 PSD2Q9BQI7 771 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 ZNF426Q9BUY5 554 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 PTDSS2Q9BVG9 487 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 AMBRA1Q9C0C7 1298 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
COL6A6-203ENST00000511332 RIMS3Q9UJD0 308 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 FAM32AQ9Y421 112 aaKnown RBP11.48□□□□□ -0.57
COL6A6-203ENST00000511332 ENPP4Q9Y6X5 453 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 V9GYQ6 96 aa11.48□□□□□ -0.57
COL6A6-203ENST00000511332 A1L4Q6 167 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 AQP7P3A6NL99 342 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 FTCDNL1E5RQL4 147 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 PRSS44E7EML9 344 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 EBAG9O00559 213 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 FZD7O75084 574 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 LYPD3O95274 346 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CLDN1O95832 211 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 THY1P04216 161 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 ATP6V1B2P21281 511 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 H3F3AP84243 136 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 TRAP1Q12931 704 aaKnown RBP11.47□□□□□ -0.57
COL6A6-203ENST00000511332 PDK3Q15120 406 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CDSNQ15517 529 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 OTUD3Q5T2D3 398 aaPredicted RBP11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CYP2R1Q6VVX0 501 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CCDC121Q6ZUS5 278 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 LIX1LQ8IVB5 337 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 FAM86B1Q8N7N1 296 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 KTI12Q96EK9 354 aaPredicted RBP11.47□□□□□ -0.57
COL6A6-203ENST00000511332 PYURFQ96I23 114 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CLPTM1LQ96KA5 538 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 HS6ST2Q96MM7 605 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 FNDC11Q9BVV2 318 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 KLHL4Q9C0H6 718 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 BCO1Q9HAY6 547 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CHST11Q9NPF2 352 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 FOXD3Q9UJU5 478 aaPredicted RBP11.47□□□□□ -0.57
COL6A6-203ENST00000511332 A4GNTQ9UNA3 340 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 PROCRQ9UNN8 238 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 CORINQ9Y5Q5 1042 aa11.47□□□□□ -0.57
COL6A6-203ENST00000511332 ICE1Q9Y2F5 2266 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 IGKV3D-15A0A087WSY6 115 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 NKX2-6A6NCS4 301 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 ZNF724A8MTY0 619 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 GPR171O14626 319 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 MSTNO14793 375 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SMNDC1O75940 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL6A6-203ENST00000511332 AKR7A3O95154 331 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 VAMP5O95183 116 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 MT-ATP6P00846 226 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SEMG1P04279 462 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 YES1P07947 543 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 CD8BP10966 210 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 RHCEP18577 417 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 PTNP21246 168 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 KIR2DL2P43627 348 aaPredicted RBP11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SLC16A1P53985 500 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 TRAM2Q15035 370 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 FBXL19-AS1Q494R0 122 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 VWA1Q6PCB0 445 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 WDR88Q6ZMY6 472 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 STK32CQ86UX6 486 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 ADPRHL1Q8NDY3 354 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 TAAR8Q969N4 342 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SLC25A36Q96CQ1 311 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 ZNF300Q96RE9 604 aaPredicted RBP11.46□□□□□ -0.57
COL6A6-203ENST00000511332 PRSS27Q9BQR3 290 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SF3B5Q9BWJ5 86 aaKnown RBP11.46□□□□□ -0.57
COL6A6-203ENST00000511332 ASPNQ9BXN1 380 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 UCK2Q9BZX2 261 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 LRMDAQ9H2I8 198 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 MMADHCQ9H3L0 296 aaPredicted RBP11.46□□□□□ -0.57
COL6A6-203ENST00000511332 ANKRD19PQ9H560 264 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 MAGIXQ9H6Y5 334 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 JKAMPQ9P055 326 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 PLEKHB1Q9UF11 243 aaPredicted RBP11.46□□□□□ -0.57
COL6A6-203ENST00000511332 CLEC4AQ9UMR7 237 aa11.46□□□□□ -0.57
COL6A6-203ENST00000511332 SPTAN1Q13813 2472 aaKnown RBP11.46□□□□□ -0.58
COL6A6-203ENST00000511332 PTPN13Q12923 2485 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 ZNF716A6NP11 495 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 J3KTA2 159 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 hCG_2039718K7EN88 272 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 KPNA4O00629 521 aaPredicted RBP11.45□□□□□ -0.58
COL6A6-203ENST00000511332 IGF2P01344 180 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 BGLAPP02818 100 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 FABP3P05413 133 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 HOXB6P17509 224 aaKnown RBP11.45□□□□□ -0.58
COL6A6-203ENST00000511332 KLK2P20151 261 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 YAP1P46937 504 aaKnown RBP11.45□□□□□ -0.58
COL6A6-203ENST00000511332 VLDLRP98155 873 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 TFF3Q07654 80 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 FLOT2Q14254 428 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 P3H2Q8IVL5 708 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 TUSC5Q8IXB3 177 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
COL6A6-203ENST00000511332 TMEM99Q8N816 258 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms