RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 FMO6PO60774 539 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 DNAJA2O60884 412 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 RAD51DO75771 328 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ATE1O95260 518 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 C6orf47O95873 294 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 UBTFL6P0CB48 400 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 ETFAP13804 333 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ZNF23P17027 643 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 PEBP1P30086 187 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 GGT2P36268 569 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ATP6V1E1P36543 226 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 MARCKSL1P49006 195 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 HSF1Q00613 529 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 SLC7A5Q01650 507 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 GALNT1Q10472 559 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 SNTB2Q13425 540 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 SNTB1Q13884 538 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 NNATQ16517 81 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 C2orf68Q2NKX9 166 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 SAMD4BQ5PRF9 694 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 RBM20Q5T481 1227 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 ANKRD34AQ69YU3 496 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 GPR139Q6DWJ6 353 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NIPAL3Q6P499 406 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ULK3Q6PHR2 472 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 TIFABQ6ZNK6 161 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 MRPL21Q7Z2W9 205 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 LILRB2Q8N423 598 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 MARVELD2Q8N4S9 558 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 RBM15BQ8NDT2 890 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 CCDC54Q8NEL0 328 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 OR13G1Q8NGZ3 307 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 MFSD8Q8NHS3 518 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ZNF671Q8TAW3 534 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 PPP1R14AQ96A00 147 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 LRGUKQ96M69 825 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 TRNT1Q96Q11 434 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 OR4K3Q96R72 315 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 OR52E6Q96RD3 313 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 S100A13Q99584 98 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 THUMPD3Q9BV44 507 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 METTL17Q9H7H0 456 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 C10orf88Q9H8K7 445 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 CRLF2Q9HC73 371 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ZNF701Q9NV72 531 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 FGFR1OP2Q9NVK5 253 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 LEF1Q9UJU2 399 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 RNF11Q9Y3C5 154 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 MED31Q9Y3C7 131 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 RAP2CQ9Y3L5 183 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NAV3Q8IVL0 2385 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 DOCK9Q9BZ29 2069 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 PIKFYVEQ9Y2I7 2098 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NPIPA5A0A0B4J1W7 369 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 TRAV38-1A0A0B4J264 116 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 GGT3PA6NGU5 568 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 AQP7P3A6NL99 342 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NPIPA7E9PJI5 369 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 H7C417 338 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 UBDO15205 165 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 CCNB2O95067 398 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NKX2-2O95096 273 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 DUS4LO95620 317 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 LY6G6DO95868 133 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 HLA-DQA2P01906 255 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NPIPA8P0DM63 369 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 CCNA2P20248 432 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 CD40P25942 277 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 SOX18P35713 384 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 RPS6KA3P51812 740 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 TAS2R41P59536 307 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 EMX2Q04743 252 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 CD47Q08722 323 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 EXOSC7Q15024 291 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 GSG1Q2KHT4 349 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 CR1LQ2VPA4 569 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 FAM69AQ5T7M9 428 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 LETMD1Q6P1Q0 360 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 TMEM107Q6UX40 140 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 USP43Q70EL4 1123 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 FKBP9P1Q75LS8 142 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 H1FNTQ75WM6 255 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 C10orf107Q8IVU9 208 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 AGGF1Q8N302 714 aaeCLIP2.54□□□□□ -2
CLOCK-209ENST00000511124 ATG16L2Q8NAA4 619 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 OR8S1Q8NH09 359 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 OR52N5Q8NH56 324 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ZNF519Q8TB69 540 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 LKAAEAR1Q8TD35 194 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 C11orf24Q96F05 449 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 SMIM14Q96QK8 99 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 ALG12Q9BV10 488 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 FNDC11Q9BVV2 318 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 LINC00470Q9BZP3 86 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 OPN3Q9H1Y3 402 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 AKIRIN1Q9H9L7 192 aaPredicted RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 DNAJB11Q9UBS4 358 aa2.54□□□□□ -2
CLOCK-209ENST00000511124 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.54□□□□□ -2
CLOCK-209ENST00000511124 SF3B6Q9Y3B4 125 aaKnown RBP2.54□□□□□ -2
CLOCK-209ENST00000511124 ADAM18Q9Y3Q7 739 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms