RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 DNAJB11Q9UBS4 358 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 TCRBV16S1A1N1A0A5B0 115 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 AIREO43918 545 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 KIAA0513O60268 411 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 NPR2P20594 1047 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PCYT1AP49585 367 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 AP3S2P59780 193 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 SCN1BQ07699 218 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 FOXF1Q12946 379 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 WIPI1Q5MNZ9 446 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 P2RY8Q86VZ1 359 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PARP8Q8N3A8 854 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 CLIP4Q8N3C7 705 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 OR9Q2Q8NGE9 314 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 OR13C2Q8NGS9 318 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 SGCDQ92629 289 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 CHRNA10Q9GZZ6 450 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ING4Q9UNL4 249 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 LINC00854A0A1B0GVQ3 168 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 C4BPBP20851 252 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 CHMP24386 653 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 RAE1P78406 368 aaKnown RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 PGGHGQ32M88 737 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 IDNKQ5T6J7 187 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 RNF220Q5VTB9 566 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 MARCH9Q86YJ5 346 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 SFTPA2Q8IWL1 248 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ZNF454Q8N9F8 522 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 AKAP1Q92667 903 aaKnown RBP eCLIP4.69□□□□□ -1.66
PHF3-210ENST00000509876 INTS12Q96CB8 462 aaKnown RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 GIMAP5Q96F15 307 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 BCL2L10Q9HD36 194 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PAK1IP1Q9NWT1 392 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 SLC22A23A1A5C7 686 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 H3BNX3 289 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 FZD7O75084 574 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 NKX2-2O95096 273 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 SP1P08047 785 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ERGP11308 486 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ZNF35P13682 527 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 CA5AP35218 305 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 AQP2P41181 271 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ARFRP1Q13795 201 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 RSU1Q15404 277 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 TAB1Q15750 504 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.69□□□□□ -1.66
PHF3-210ENST00000509876 RSBN1Q5VWQ0 802 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 B3GNTL1Q67FW5 361 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 SLC22A25Q6T423 547 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 SLC46A3Q7Z3Q1 461 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 TRAPPC6BQ86SZ2 158 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 CHCHD6Q9BRQ6 235 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 C1orf198Q9H425 327 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 IL20RAQ9UHF4 553 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 NDRG4Q9ULP0 352 aaKnown RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 CLEC4AQ9UMR7 237 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PMF1-BGLAPU3KQ54 211 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 MYO18AQ92614 2054 aaKnown RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 SBK3P0C264 359 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 TMIGD3P0DMS9 266 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 RAB25P57735 213 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 HSF1Q00613 529 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 GPR107Q5VW38 600 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 USP43Q70EL4 1123 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 ACBD7Q8N6N7 88 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 EXTL1Q92935 676 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 TAMM41Q96BW9 452 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 RAB39BQ96DA2 213 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 NEDD4LQ96PU5 975 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PRO3102Q9H379 93 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 TP63Q9H3D4 680 aaPredicted RBP4.69□□□□□ -1.66
PHF3-210ENST00000509876 AMBNQ9NP70 447 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 MED17Q9NVC6 651 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PRDM4Q9UKN5 801 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 RAXQ9Y2V3 346 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 PCDHGA3Q9Y5H0 932 aa4.69□□□□□ -1.66
PHF3-210ENST00000509876 AGAP5A6NIR3 686 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 FBP2O00757 339 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 LGI1O95970 557 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 GSTT2BP0CG30 244 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 DCKP27707 260 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 ELK4P28324 431 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 EMDP50402 254 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 VBP1P61758 197 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 YBX1P67809 324 aaKnown RBP4.68□□□□□ -1.66
PHF3-210ENST00000509876 SYT14P1Q58G82 188 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 FHL5Q5TD97 284 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 B3GNT6Q6ZMB0 384 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.68□□□□□ -1.66
PHF3-210ENST00000509876 DPPA2Q7Z7J5 298 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 CCDC103Q8IW40 242 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 IQCF1Q8N6M8 205 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 OR5AK2Q8NH90 309 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 ANKRD9Q96BM1 317 aaPredicted RBP4.68□□□□□ -1.66
PHF3-210ENST00000509876 ZNF764Q96H86 408 aaPredicted RBP4.68□□□□□ -1.66
PHF3-210ENST00000509876 RASL10BQ96S79 203 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 MARCH7Q9H992 704 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms