RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 LRRC37BQ96QE4 947 aa8.98□□□□□ -0.97
MBD4-208ENST00000509828 SF3B5Q9BWJ5 86 aaKnown RBP8.98□□□□□ -0.97
MBD4-208ENST00000509828 TUBB1Q9H4B7 451 aa8.98□□□□□ -0.97
MBD4-208ENST00000509828 GIMAP2Q9UG22 337 aa8.98□□□□□ -0.97
MBD4-208ENST00000509828 NOX1Q9Y5S8 564 aa8.98□□□□□ -0.97
MBD4-208ENST00000509828 DNAJC15Q9Y5T4 150 aa8.98□□□□□ -0.97
MBD4-208ENST00000509828 HEATR1Q9H583 2144 aaKnown RBP8.98□□□□□ -0.97
MBD4-208ENST00000509828 CENPVL1A0A0U1RR11 272 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 TMEM89A2RUT3 159 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 ZNF208O43345 1280 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 TRIM13O60858 407 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 CPSF4O95639 269 aaKnown RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 BCL10O95999 233 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 SAGP10523 405 aaPredicted RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 IMPDH2P12268 514 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 CHI3L1P36222 383 aaPredicted RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 LIMS1P48059 325 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 COMPP49747 757 aaPredicted RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 HBA1P69905 142 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 H3F3AP84243 136 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 DAG1Q14118 895 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 MAPK14Q16539 360 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 NIPAL3Q6P499 406 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 TNFAIP8L2Q6P589 184 aaPredicted RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 EMBQ6PCB8 327 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 C10orf107Q8IVU9 208 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 MNS1Q8NEH6 495 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 NUP37Q8NFH4 326 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 SEMA6DQ8NFY4 1073 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 OR51F2Q8NH61 342 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 BCL2L2Q92843 193 aaPredicted RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 RAB8BQ92930 207 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 ROPN1LQ96C74 230 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 COQ8BQ96D53 544 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 ZNF385AQ96PM9 386 aaKnown RBP8.97□□□□□ -0.97
MBD4-208ENST00000509828 DOK1Q99704 481 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 DPY30Q9C005 99 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 ZNF350Q9GZX5 532 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 SERHL2Q9H4I8 314 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 ZNF442Q9H7R0 627 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 CRLF2Q9HC73 371 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 POLE3Q9NRF9 147 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 ADPRHL2Q9NX46 363 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 TREM2Q9NZC2 230 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 OSGIN1Q9UJX0 560 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 USP22Q9UPT9 525 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 CMAHPQ9Y471 501 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 SPEF1Q9Y4P9 236 aa8.97□□□□□ -0.97
MBD4-208ENST00000509828 SMIM23A6NLE4 172 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 TMEM233B4DJY2 109 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 AP3D1O14617 1153 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 RIPK2O43353 540 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 PPIHO43447 177 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 MSMBP08118 114 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 HOXB1P14653 301 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 ANPEPP15144 967 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 TCN1P20061 433 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 EPHA1P21709 976 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 CALCRP30988 508 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 CRHR1P34998 444 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 KHKP50053 298 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 MAP2K6P52564 334 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 COPZ1P61923 177 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 ROR2Q01974 943 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 HGFACQ04756 655 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 SNTB2Q13425 540 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 RIN1Q13671 783 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 WHAMMP3Q1A5X7 153 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 GKAP1Q5VSY0 366 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 REP15Q6BDI9 236 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 TYW3Q6IPR3 259 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 KRT80Q6KB66 452 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 DEF8Q6ZN54 512 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 RNF165Q6ZSG1 346 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 ZCCHC23Q6ZST2 131 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 GSPT2Q8IYD1 628 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 CDK20Q8IZL9 346 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 C17orf53Q8N3J3 647 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 CADM2Q8N3J6 435 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 BPIFB2Q8N4F0 458 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 ZIC4Q8N9L1 334 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 VPS37AQ8NEZ2 397 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 IL17RDQ8NFM7 739 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 OIT3Q8WWZ8 545 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 CNOT9Q92600 299 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 TUBGCP3Q96CW5 907 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 ZNF317Q96PQ6 595 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 ALKBH3Q96Q83 286 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 GATA5Q9BWX5 397 aaPredicted RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 SUCNR1Q9BXA5 334 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 MS4A5Q9H3V2 200 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 PIF1Q9H611 641 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 EXOSC3Q9NQT5 275 aaKnown RBP8.96□□□□□ -0.98
MBD4-208ENST00000509828 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
MBD4-208ENST00000509828 MEGF8Q7Z7M0 2845 aa8.95□□□□□ -0.98
MBD4-208ENST00000509828 ARPC4-TTLL3A0A0A6YYG9 625 aa8.95□□□□□ -0.98
MBD4-208ENST00000509828 ZC3H12DA2A288 527 aaKnown RBP8.95□□□□□ -0.98
MBD4-208ENST00000509828 CFAP73A6NFT4 308 aa8.95□□□□□ -0.98
MBD4-208ENST00000509828 LIPT2A6NK58 231 aa8.95□□□□□ -0.98
MBD4-208ENST00000509828 AQP7P3A6NL99 342 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms