RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 TSGA10Q9BZW7 698 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 BLZF1Q9H2G9 400 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF385DQ9H6B1 395 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RANBP3Q9H6Z4 567 aaPredicted RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 GEMIN7Q9H840 131 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 GCNT4Q9P109 453 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SEC14L4Q9UDX3 406 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RARRES3Q9UL19 164 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SCML2Q9UQR0 700 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 PPP2R2CQ9Y2T4 447 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 STARD10Q9Y365 291 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 DOCK2Q92608 1830 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 COL6A3P12111 3177 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 A0A0C4DFX4 3053 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 A0A0G2JMZ2 1700 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 OTOFQ9HC10 1997 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RANBP2P49792 3224 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 FAM172BPA6NC97 362 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 TUBAL3A6NHL2 446 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF724A8MTY0 619 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SUPT3HB4E1H0 165 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 NEDD8-MDP1E9PL57 170 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 C11orf98E9PRG8 122 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 GOLGA8TH3BQL2 631 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 HAS3O00219 553 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 FBP2O00757 339 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 LATO43561 262 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 JCHAINP01591 159 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RPLP0P05388 317 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SRMP19623 302 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 CALML3P27482 149 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 OR1G1P47890 313 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 PAX9P55771 341 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 CARD18P57730 90 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF85Q03923 595 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 GNMTQ14749 295 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RAB35Q15286 201 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 UBE2V2Q15819 145 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 MICBQ29980 383 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RBMS3Q6XE24 437 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 GPRIN3Q6ZVF9 776 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 VTCN1Q7Z7D3 282 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 TRPT1Q86TN4 253 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SYCE1Q8N0S2 351 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RNF10Q8N5U6 811 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 DEFB123Q8N688 67 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ALLCQ8N6M5 410 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 STPG4Q8N801 248 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 FNDC8Q8TC99 324 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 DTX3LQ8TDB6 740 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 LRRC15Q8TF66 581 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ARNTL2Q8WYA1 636 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 KIFAP3Q92845 792 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 STMN2Q93045 179 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 BIRC7Q96CA5 298 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 TMA16Q96EY4 203 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 FOXN4Q96NZ1 517 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 OPALINQ96PE5 141 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 IL4I1Q96RQ9 567 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 CITED1Q99966 193 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 BPIFA3Q9BQP9 254 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RPP25Q9BUL9 199 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 C20orf24Q9BUV8 137 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 TSSK1BQ9BXA7 367 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 COA1Q9GZY4 146 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 GLT8D2Q9H1C3 349 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 PPDPFQ9H3Y8 114 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RHOJQ9H4E5 214 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 BICC1Q9H694 974 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SP140LQ9H930 580 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 CHRAC1Q9NRG0 131 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 PSMC3IPQ9P2W1 217 aaPredicted RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 RNF7Q9UBF6 113 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 SAMD4AQ9UPU9 718 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 TCF19Q9Y242 345 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 CSDC2Q9Y534 153 aaKnown RBP1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ALG6Q9Y672 507 aa1.89□□□□□ -2.11
PDE4D-218ENST00000509368 ELP1O95163 1332 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 MYH15Q9Y2K3 1946 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 A0A087WW49 117 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 A0A1B0GUA9 196 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TMEM210A6NLX4 147 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 GABRR3A8MPY1 467 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PRAC2D3DTV9 90 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 FOXE1O00358 373 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 NDUFAB1O14561 156 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 B4GAT1O43505 415 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RAMP3O60896 148 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 MYO1DO94832 1006 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ERLIN2O94905 339 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 KLHL2O95198 593 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OR5F1O95221 314 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 H6PDO95479 791 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PPP1R3DO95685 299 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 GNA14O95837 355 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ALDOBP05062 364 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ATP1B2P14415 290 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 POLR2EP19388 210 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ATP5A1P25705 553 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RORAP35398 523 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms