RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 EXT2Q93063 718 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 ATP6V1E2Q96A05 226 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 REXO5Q96IC2 774 aaKnown RBP3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 METTL2AQ96IZ6 378 aaKnown RBP3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 MUS81Q96NY9 551 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 PSD2Q9BQI7 771 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 PIMREGQ9BSJ6 248 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 INPP5KQ9BT40 448 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 TBL1XR1Q9BZK7 514 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 TOR3AQ9H497 397 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF696Q9H7X3 374 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 MED17Q9NVC6 651 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 GIN1Q9NXP7 522 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 ING1Q9UK53 422 aaPredicted RBP3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 PCTPQ9UKL6 214 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 NDRG4Q9ULP0 352 aaKnown RBP3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 CLEC4AQ9UMR7 237 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC12A4Q9UP95 1085 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 CORO2BQ9UQ03 480 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 STK38LQ9Y2H1 464 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 PPP2R2CQ9Y2T4 447 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC25A15Q9Y619 301 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 FKBP7Q9Y680 259 aa3.8□□□□□ -1.8
CALCOCO2-213ENST00000509112 A0A0G2JK05 382 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM157AC9JC47 383 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 NPIPB8E9PQR5 432 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 M0R3H8 397 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 PDLIM1O00151 329 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 UPK1AO00322 258 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TNFSF11O14788 317 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 DNPH1O43598 174 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 PCDH7O60245 1069 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TBX19O60806 448 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 SMIM24O75264 130 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 NXPH3O95157 252 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ESRRBO95718 433 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 OXSR1O95747 527 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 KRT6AP02538 564 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 KRT6BP04259 564 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 IL3P08700 152 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 APEHP13798 732 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ITGA2P17301 1181 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 IGHV1-2P23083 117 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TCEA1P23193 301 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FKBP2P26885 142 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TIA1P31483 386 aaKnown RBP eCLIP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 KRT6CP48668 564 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ALDH9A1P49189 494 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FABP6P51161 128 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF41P51814 821 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 DVL1P1P54792 670 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 RAE1P78406 368 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 POU3F1Q03052 451 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 CAV1Q03135 178 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC18A2Q05940 514 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF155Q12901 538 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 STX5Q13190 355 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 SELENBP1Q13228 472 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TP53BP2Q13625 1128 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 RASA2Q15283 850 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 EFNB3Q15768 340 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 GRAMD1BQ3KR37 738 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM174BQ3ZCQ3 159 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 CD300EQ496F6 205 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 GLE1Q53GS7 698 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM209BQ5JX69 171 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 SH2D4BQ5SQS7 431 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 LGSNQ5TDP6 509 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 IKBIPQ70UQ0 350 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 LRRC8AQ8IWT6 810 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TEX29Q8N6K0 151 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 C1orf52Q8N6N3 182 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF433Q8N7K0 673 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 PTGR2Q8N8N7 351 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 CDRT4Q8N9R6 151 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TOR1AIP2Q8NFQ8 470 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 CEP70Q8NHQ1 597 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 B4GALNT2Q8NHY0 566 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZFP90Q8TF47 636 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 C16orf78Q8WTQ4 265 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ABHD3Q8WU67 409 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 KCTD4Q8WVF5 259 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 OIT3Q8WWZ8 545 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF75CPQ92670 426 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 EXOSC8Q96B26 276 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ELP4Q96EB1 424 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 RNF145Q96MT1 663 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 SRXN1Q9BYN0 137 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 HOXD1Q9GZZ0 328 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 IQCGQ9H095 443 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 COQ10BQ9H8M1 238 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ANKRA2Q9H9E1 313 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FKRPQ9H9S5 495 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 MOV10Q9HCE1 1003 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 MYNNQ9NPC7 610 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 PFDN4Q9NQP4 134 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 UBQLN4Q9NRR5 601 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 MRPS18AQ9NVS2 196 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms