RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TACR3P29371 465 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 ALDH3A1P30838 453 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 ACTG1P63261 375 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 KCNJ10P78508 379 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 HPCAP84074 193 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 OR7A5Q15622 319 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 GPAT3Q53EU6 434 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 ZCCHC23Q6ZST2 131 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 HOMEZQ8IX15 550 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 SVOPLQ8N434 492 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 NEU4Q8WWR8 484 aaPredicted RBP13.87□□□□□ -0.19
CXCL1-202ENST00000509101 PMM1Q92871 262 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 BOD1Q96IK1 185 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 SAP130Q9H0E3 1048 aa13.87□□□□□ -0.19
CXCL1-202ENST00000509101 METTL17Q9H7H0 456 aaPredicted RBP13.87□□□□□ -0.19
CXCL1-202ENST00000509101 A0A096LPE4 126 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 A0A1W2PPZ6 126 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 GUSBP08236 651 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 IFNGR1P15260 489 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 SELENOPP49908 381 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 KHKP50053 298 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 DVL1P1P54792 670 aaPredicted RBP13.86□□□□□ -0.19
CXCL1-202ENST00000509101 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 ANKRD16Q6P6B7 361 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 SPATA21Q7Z572 469 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 MYPOPQ86VE0 399 aaPredicted RBP13.86□□□□□ -0.19
CXCL1-202ENST00000509101 ANKRD46Q86W74 232 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 OR4F15Q8NGB8 312 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 EPS8L3Q8TE67 593 aaKnown RBP13.86□□□□□ -0.19
CXCL1-202ENST00000509101 WDR60Q8WVS4 1066 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 TUBGCP3Q96CW5 907 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 CRNNQ9UBG3 495 aaPredicted RBP13.86□□□□□ -0.19
CXCL1-202ENST00000509101 PCDHB14Q9Y5E9 798 aa13.86□□□□□ -0.19
CXCL1-202ENST00000509101 ARPC4-TTLL3A0A0A6YYG9 625 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 SH3PXD2BA1X283 911 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 PRAMEF27A3QJZ7 478 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 LIPT2A6NK58 231 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 AQP7P3A6NL99 342 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 LYNX1G3V0Z9 82 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 RNASET2O00584 256 aaKnown RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 KCNAB3O43448 404 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 RGS9O75916 674 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 CPSF4O95639 269 aaKnown RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 IGLV1-44P01699 117 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 GPIP06744 558 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 CELA3BP08861 270 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 LYNX1P0DP58 116 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 NPR2P20594 1047 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 PCMT1P22061 227 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 ARRB2P32121 409 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 THBS4P35443 961 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 CLDN8P56748 225 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 HGFACQ04756 655 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 RIN1Q13671 783 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 LINGO2Q7L985 606 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 CDK20Q8IZL9 346 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 ZNF786Q8N393 782 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 NUP37Q8NFH4 326 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 BCL2L2Q92843 193 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 ZMYND19Q96E35 227 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 SF3B5Q9BWJ5 86 aaKnown RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 NELFAQ9H3P2 528 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 TPK1Q9H3S4 243 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 ZNF442Q9H7R0 627 aa13.85□□□□□ -0.19
CXCL1-202ENST00000509101 FBXO9Q9UK97 447 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-202ENST00000509101 A0A0A6YYJ9 748 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 SLCO1B7G3V0H7 640 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 SCN2BO60939 215 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 EGR1P18146 543 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 UQCRC2P22695 453 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 ADRM1Q16186 407 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 C3orf36Q3SXR2 165 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 AP1ARQ63HQ0 302 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 SAXO2Q658L1 398 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 NIPAL3Q6P499 406 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 GLCCI1Q86VQ1 547 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 UBASH3BQ8TF42 649 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 ZFAND2BQ8WV99 257 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 APOPT1Q96IL0 206 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 DOK1Q99704 481 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 ADPRHL2Q9NX46 363 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 ZDHHC2Q9UIJ5 367 aa13.84□□□□□ -0.19
CXCL1-202ENST00000509101 PKD1L1Q8TDX9 2849 aa13.83□□□□□ -0.19
CXCL1-202ENST00000509101 TMEM129A0AVI4 362 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 UPK3AO75631 287 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 IGKV3-15P01624 115 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 C1QCP02747 245 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 IGFBP1P08833 259 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 PAX7P23759 505 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 CHI3L1P36222 383 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 IL1RL1Q01638 556 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 MAD2L1Q13257 205 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 SYPL1Q16563 259 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 TMEM225Q6GV28 225 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 UGT2A3Q6UWM9 527 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 CMIPQ8IY22 773 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 C3orf56Q8N813 242 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 EIF1ADQ8N9N8 165 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms