RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PCSK4Q6UW60 755 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 RHOUQ7L0Q8 258 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF550Q7Z398 422 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 GDF7Q7Z4P5 450 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 PLCZ1Q86YW0 608 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 EID3Q8N140 333 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 FAM109AQ8N4B1 249 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 AMER2Q8N7J2 671 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 FADS6Q8N9I5 356 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR2M7Q8NG81 312 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR1J4Q8NGS1 313 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 B4GALNT2Q8NHY0 566 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC26A7Q8TE54 656 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 DUSP19Q8WTR2 217 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC25A43Q8WUT9 341 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 WDR60Q8WVS4 1066 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 LZICQ8WZA0 190 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 ARSGQ96EG1 525 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 OTUB1Q96FW1 271 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 VKORC1Q9BQB6 163 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC39A3Q9BRY0 314 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 POLR2J2Q9GZM3 115 aaKnown RBP4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 POLR2J3Q9H1A7 115 aaKnown RBP4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 PROK2Q9HC23 129 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 ACKR4Q9NPB9 350 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 KLHL1Q9NR64 748 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 ADPRHL2Q9NX46 363 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 DKK2Q9UBU2 259 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 SEC14L3Q9UDX4 400 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 RPS6KA6Q9UK32 745 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC13A4Q9UKG4 626 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 BAG5Q9UL15 447 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 MKLN1Q9UL63 735 aa4.97□□□□□ -1.61
HMGB1P44-201ENST00000508597 ESPL1Q14674 2120 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 CENPVL1A0A0U1RR11 272 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ANKUB1A6NFN9 424 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 K7EM74 188 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 M0QX08 132 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 M0QYG6 137 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 CXCR6O00574 342 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 SCO2O43819 266 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 HCN1O60741 890 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 FMO6PO60774 539 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 MFN2O95140 757 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 LGI1O95970 557 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 F10P00742 488 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 IGHG3P01860 377 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 C1QCP02747 245 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 HPNP05981 417 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 GRPP07492 148 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF24P17028 368 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 GGT1P19440 569 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 PGCP20142 388 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 IFNA8P32881 189 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 PGM1P36871 562 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 DLX5P56178 289 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 COPZ1P61923 177 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 PPIAP62937 165 aaKnown RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 SELENOWP63302 87 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 EEF1A1P68104 462 aaKnown RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 LY6DQ14210 128 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC10A1Q14973 349 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 NADK2Q4G0N4 442 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 PDZK1Q5T2W1 519 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 PRAMEF20Q5VT98 475 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 GLYATQ6IB77 296 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 APOOLQ6UXV4 268 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 RINLQ6ZS11 566 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 MARCH3Q86UD3 253 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 IFNEQ86WN2 208 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ARMC8Q8IUR7 673 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 C10orf67Q8IYJ2 551 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 C10orf111Q8N326 155 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF614Q8N883 585 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 Q8NA96 180 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM71CQ8NEG0 241 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR2M3Q8NG83 312 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR4K17Q8NGC6 315 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR5W2Q8NH69 310 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAR1Q8WVX9 515 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 TMEM234Q8WY98 164 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ST8SIA1Q92185 356 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 NR4A3Q92570 626 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 PROX1Q92786 737 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 MAL2Q969L2 176 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM162AQ96A26 154 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 MCUR1Q96AQ8 359 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ASB9Q96DX5 294 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 DCLRE1CQ96SD1 692 aaKnown RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 BARD1Q99728 777 aaKnown RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 THTPAQ9BU02 230 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 TTTY12Q9BZ98 90 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRIM15Q9C019 465 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 LRMDAQ9H2I8 198 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 UBQLN3Q9H347 655 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZDHHC11Q9H8X9 412 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 DEPPQ9NTK1 212 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 OLAHQ9NV23 265 aa4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P44-201ENST00000508597 ETAA1Q9NY74 926 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms