RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 NEURL1O76050 574 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CDRT1O95170 752 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 STBD1O95210 358 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MPC2O95563 127 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 HPP00738 406 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MT-ND4LP03901 98 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 HLA-DPB1P04440 258 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GLAP06280 429 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CD2P06729 351 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 HOXC4P09017 264 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 LINC00614P0C842 121 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GKN3PP0CG01 181 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SPP1P10451 314 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GABRA1P14867 456 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RPA2P15927 270 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MGMTP16455 207 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GABRB1P18505 474 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CNR1P21554 472 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 YWHAQP27348 245 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CRABP1P29762 137 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GABRA5P31644 462 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CCR7P32248 378 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CEACAM6P40199 344 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CDKN2CP42773 168 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CRATP43155 626 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RFX3P48380 749 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 STK19P49842 368 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 HCCSP53701 268 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 DLX5P56178 289 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CTBP2P56545 445 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SEC61A1P61619 476 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PKIAP61925 76 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SNRPGP62308 76 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MRPS10P82664 201 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RPL36AP83881 106 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CRYZQ08257 329 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PPIGQ13427 754 aaKnown RBP eCLIP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 VEZF1Q14119 521 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GPR18Q14330 331 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 STXBP2Q15833 593 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MAPKAPK3Q16644 382 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PLK5Q496M5 336 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PYCR3Q53H96 274 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SGO1Q5FBB7 561 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RNASE10Q5GAN6 216 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 XKR7Q5GH72 579 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 OR2B11Q5JQS5 317 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 KRBOX4Q5JUW0 171 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RIPPLY2Q5TAB7 128 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 BCL2L15Q5TBC7 163 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ATPAF1Q5TC12 328 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM46CQ5VWP2 391 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CDC42EP5Q6NZY7 148 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CNIH2Q6PI25 160 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 LINGO4Q6UY18 593 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GCNT7Q6ZNI0 430 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 TMEM179Q6ZVK1 233 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ABHD13Q7L211 337 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RTL10Q7L3V2 364 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 TRMT11Q7Z4G4 463 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SERPINA11Q86U17 422 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ISCA2Q86U28 154 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CYP4Z1Q86W10 505 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PAQR7Q86WK9 346 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 METTL23Q86XA0 190 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CEP97Q8IW35 865 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 OR6V1Q8N148 313 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 LINC00471Q8N535 108 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GPR26Q8NDV2 337 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ADPRHL1Q8NDY3 354 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GMCL1P1Q8NEA9 526 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 DNAAF1Q8NEP3 725 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC24A4Q8NFF2 622 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 OR2L5Q8NG80 312 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 OR6C4Q8NGE1 309 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 STAG3L4Q8TBR4 150 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ACOT11Q8WXI4 607 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 DNASE1L2Q92874 299 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PABPC5Q96DU9 382 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RAB3CQ96E17 227 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ZBED6CLQ96FA7 236 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ELMOD3Q96FG2 381 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 DYNLL2Q96FJ2 89 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RBM18Q96H35 190 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ADAD1Q96M93 576 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 NOL4LQ96MY1 436 aaPredicted RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF583Q96ND8 569 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF599Q96NL3 588 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 S100A13Q99584 98 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PKMYT1Q99640 499 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 RTP3Q9BQQ7 232 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PAAF1Q9BRP4 392 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 CRB3Q9BUF7 120 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 COLEC11Q9BWP8 271 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SEC11CQ9BY50 192 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 TOLLIPQ9H0E2 274 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 TUBA4BQ9H853 241 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MID1IP1Q9NPA3 183 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 NANSQ9NR45 359 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PLSCR4Q9NRQ2 329 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms