RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 IDO1P14902 403 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PRKACAP17612 351 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 IMPDH1P20839 514 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CD1BP29016 333 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 SLC1A2P43004 574 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 RPL5P46777 297 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 STARP49675 285 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 THOP1P52888 689 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 HERV-K104P63124 156 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 HERVK_113P63132 956 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CRADDP78560 199 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 MGAT3Q09327 533 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF235Q14590 738 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 POU6F1Q14863 301 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CLPPQ16740 277 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 HKDC1Q2TB90 917 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ELFN2Q5R3F8 820 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 C10orf120Q5SQS8 335 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 FAM72AQ5TYM5 149 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 HIST2H2AA3Q6FI13 130 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 FAM72DQ6L9T8 149 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TTC23LQ6PF05 361 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PLXDC2Q6UX71 529 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 RNF165Q6ZSG1 346 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 C16orf62Q7Z3J2 963 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 FAM72BQ86X60 149 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CROCCP3Q8IVE0 287 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TDHQ8IZJ6 230 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 STK40Q8N2I9 435 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 C1orf52Q8N6N3 182 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR9A1PQ8NGU1 263 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 HMGCLL1Q8TB92 370 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 THAP6Q8TBB0 222 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 SUSD6Q92537 303 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PHYHIPQ92561 330 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TMIGD2Q96BF3 282 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TADA1Q96BN2 335 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CCDC124Q96CT7 223 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ELMO2Q96JJ3 720 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 SLC45A3Q96JT2 553 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 FAM71F1Q96KD3 344 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 C7orf34Q96L11 122 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CITED1Q99966 193 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ALKBH7Q9BT30 221 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 OSBPL10Q9BXB5 764 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ERVK-6Q9BXR3 956 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 POMKQ9H5K3 350 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF696Q9H7X3 374 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 MARCH7Q9H992 704 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZFP14Q9HCL3 533 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CHRAC1Q9NRG0 131 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 RBM22Q9NW64 420 aaKnown RBP eCLIP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 GID8Q9NWU2 228 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PTTG2Q9NZH5 202 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 IL37Q9NZH6 218 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ONECUT1Q9UBC0 465 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PSORS1C1Q9UIG5 152 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 NEU3Q9UQ49 428 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TCF19Q9Y242 345 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 IFT52Q9Y366 437 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 NDUFAF1Q9Y375 327 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 NUP205Q92621 2012 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TANC1Q9C0D5 1861 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 LOC105371242A0A075B767 164 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 LOC100506127A0A0U1RQW1 187 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 LOC285095A0A1B0GVY8 99 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 RNF222A6NCQ9 220 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR6C74A6NCV1 312 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 A8MT66 165 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 C17orf105B2RV13 164 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CLDN5O00501 218 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 SDHDO14521 159 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 MRASO14807 208 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 AIM2O14862 343 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 ARPC3O15145 178 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 SAP30O75446 220 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CLN5O75503 358 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 DFFBO76075 338 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 NDUFA7O95182 113 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 WISP3O95389 354 aaPredicted RBP3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 POP4O95707 220 aaKnown RBP3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CLPTM1O96005 669 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 PGK1P00558 417 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 IGLV3-27P01718 113 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CHRNA1P02708 482 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 APOHP02749 345 aaPredicted RBP3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 HLA-DQB2P05538 268 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 ALPIP09923 528 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CFC1P0CG37 223 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 SMIM18P0DKX4 95 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CT45A8P0DMV1 189 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CT45A9P0DMV2 189 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 CYBAP13498 195 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 HLA-DOBP13765 273 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 HSD17B1P14061 328 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 MYOD1P15172 320 aa3.8□□□□□ -1.8
CALCOCO2-208ENST00000506971 MSH3P20585 1137 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms