RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CCDC103Q8IW40 242 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
DHFR-202ENST00000504396 ZNF540Q8NDQ6 660 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 C1orf162Q8NEQ5 155 aaPredicted RBP7.91□□□□□ -1.14
DHFR-202ENST00000504396 OR2T11Q8NH01 316 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 MZB1Q8WU39 189 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 OR5P2Q8WZ92 322 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 MUS81Q96NY9 551 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 OR7D2Q96RA2 312 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 OXSMQ9NWU1 459 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 CHRNA9Q9UGM1 479 aa7.91□□□□□ -1.14
DHFR-202ENST00000504396 FBXO9Q9UK97 447 aaPredicted RBP7.91□□□□□ -1.14
DHFR-202ENST00000504396 NUP214P35658 2090 aaPredicted RBP7.91□□□□□ -1.14
DHFR-202ENST00000504396 ARFGEF3Q5TH69 2177 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 ZNF716A6NP11 495 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 HMGB1P1B2RPK0 211 aaPredicted RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 KLF11O14901 512 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 RIPK2O43353 540 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 PLIN3O60664 434 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 LYPLA1O75608 230 aaPredicted RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 SNUPNO95149 360 aaKnown RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 PMS2P2O95744 297 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 ERCC1P07992 297 aaPredicted RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 GUSBP08236 651 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 FGF4P08620 206 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 LAMP1P11279 417 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 BCKDHAP12694 445 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 CPA3P15088 417 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 APEX1P27695 318 aaKnown RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 CFPP27918 469 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 LSP1P33241 339 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 SERPINF1P36955 418 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 APOBEC1P41238 236 aaKnown RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 CHN2P52757 468 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 SLC25A3Q00325 362 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 IFFO1Q0D2I5 559 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 ZNF141Q15928 474 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 KANK2Q63ZY3 851 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 EIF3MQ7L2H7 374 aaKnown RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 OLIG3Q7RTU3 272 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 MEX3DQ86XN8 651 aaKnown RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 WFDC3Q8IUB2 231 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 ARFGAP2Q8N6H7 521 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 WDR31Q8NA23 367 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 AGR3Q8TD06 166 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 ARL5BQ96KC2 179 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 PPP3R2Q96LZ3 170 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 SNX18Q96RF0 628 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 SDF2Q99470 211 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 PRPF18Q99633 342 aaKnown RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 SOX7Q9BT81 388 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 C1orf50Q9BV19 199 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 OR11A1Q9GZK7 315 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 PPCSQ9HAB8 311 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 SLC17A5Q9NRA2 495 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 CTPS2Q9NRF8 586 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 ACER3Q9NUN7 267 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 GPATCH2Q9NW75 528 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 PARPBPQ9NWS1 579 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 TMEFF2Q9UIK5 374 aaPredicted RBP7.9□□□□□ -1.14
DHFR-202ENST00000504396 MKLN1Q9UL63 735 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 SLC9A8Q9Y2E8 581 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 HDGFL3Q9Y3E1 203 aa7.9□□□□□ -1.14
DHFR-202ENST00000504396 CENPVL1A0A0U1RR11 272 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 STX11O75558 287 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 FAM107AO95990 144 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 AGR2O95994 175 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 MATN1P21941 496 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 CALRP27797 417 aaKnown RBP7.89□□□□□ -1.15
DHFR-202ENST00000504396 CRHR1P34998 444 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 SLC1A3P43003 542 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 MAP2K6P52564 334 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
DHFR-202ENST00000504396 CCNIQ14094 377 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 FAM153CQ494X1 144 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 HIKESHIQ53FT3 197 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 TSPO2Q5TGU0 170 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 HMGN2P46Q86SG4 172 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 IFT20Q8IY31 132 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 BOD1Q96IK1 185 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 SLC35G5Q96KT7 338 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 RAB1BQ9H0U4 201 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 MOV10Q9HCE1 1003 aaKnown RBP7.89□□□□□ -1.15
DHFR-202ENST00000504396 OBP2BQ9NPH6 170 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 POLE3Q9NRF9 147 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 SLC7A10Q9NS82 523 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 CA10Q9NS85 328 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 GIMAP2Q9UG22 337 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 TRAPPC4Q9Y296 219 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 SLC35A3Q9Y2D2 325 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 DNAJC15Q9Y5T4 150 aa7.89□□□□□ -1.15
DHFR-202ENST00000504396 A0A1W2PPM1 405 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 SMIM23A6NLE4 172 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 TMEM233B4DJY2 109 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 H0YHG0 523 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 PDLIM1O00151 329 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 EIF1BO60739 113 aaKnown RBP7.88□□□□□ -1.15
DHFR-202ENST00000504396 PEX11AO75192 247 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 PDE5AO76074 875 aa7.88□□□□□ -1.15
DHFR-202ENST00000504396 CRYAAP02489 173 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms