RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-210	ENST00000497638	MOK	Q9UQ07	419 aa		6.55	□□□□□ -1.36
VPS45-210	ENST00000497638	IGKV3D-15	A0A087WSY6	115 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	GNG14	A0A1W2PPG7	69 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	GXYLT2	A0PJZ3	443 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	MYO1G	B0I1T2	1018 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638		C9JVG2	144 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638		E7ESA3	106 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	UPK1A	O00322	258 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	EFNA2	O43921	213 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	PIAS1	O75925	651 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SLU7	O95391	586 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	BCL10	O95999	233 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	PNP	P00491	289 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	IGHV3-9	P01782	118 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	OR4A8	P0C604	315 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	EGR2	P11161	476 aa	Predicted RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	HSD3B1	P14060	373 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	HSD3B2	P26439	372 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	IVD	P26440	423 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	GABRA3	P34903	492 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SPR	P35270	261 aa	Predicted RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SLC1A3	P43003	542 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	GSTM5	P46439	218 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	NCBP2	P52298	156 aa	Known RBP eCLIP	6.54	□□□□□ -1.36	4e-8	■■■□□ 15.9
VPS45-210	ENST00000497638	SUMO3	P55854	103 aa	Predicted RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	PDIA2	Q13087	525 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	FASTKD3	Q14CZ7	662 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	PDK3	Q15120	406 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	TRIP10	Q15642	601 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	FAM83E	Q2M2I3	478 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SPDYE7P	Q495Y7	208 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	VPS26B	Q4G0F5	336 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	ABLIM2	Q6H8Q1	611 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	KLHL24	Q6TFL4	600 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	TMEM107	Q6UX40	140 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	IKBIP	Q70UQ0	350 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	C1QL2	Q7Z5L3	287 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	CMC1	Q7Z7K0	106 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	BPIFB2	Q8N4F0	458 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	MMGT1	Q8N4V1	131 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	ZDHHC22	Q8N966	263 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	WDR31	Q8NA23	367 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	OR4C3	Q8NH37	302 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SELENOM	Q8WWX9	145 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	MS4A14	Q96JA4	679 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	MRGPRX4	Q96LA9	322 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SLITRK2	Q9H156	845 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	PRDM13	Q9H4Q3	707 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	UNKL	Q9H9P5	680 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	ZMAT3	Q9HA38	289 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	EMC7	Q9NPA0	242 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	ESM1	Q9NQ30	184 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SLC17A5	Q9NRA2	495 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	UBQLN4	Q9NRR5	601 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	DDX28	Q9NUL7	540 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	VPS29	Q9UBQ0	182 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	SNX6	Q9UNH7	406 aa		6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	NOSIP	Q9Y314	301 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	KMT2C	Q8NEZ4	4911 aa	Known RBP	6.54	□□□□□ -1.36
VPS45-210	ENST00000497638	CXorf49	A8MYA2	514 aa	Predicted RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PDLIM1	O00151	329 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	GPR171	O14626	319 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PCDH7	O60245	1069 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	NKX2-2	O95096	273 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	NUDT14	O95848	222 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PDYN	P01213	254 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	CRYAA	P02489	173 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ITGA5	P08648	1049 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	DDC	P20711	480 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PTMS	P20962	102 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PAX7	P23759	505 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	NTS	P30990	170 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	CRHR1	P34998	444 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ELL	P55199	621 aa	Predicted RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	CLRN1	P58418	232 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PRPS1	P60891	318 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	TGFBR3	Q03167	851 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ZNF117	Q03924	483 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ADIPOQ	Q15848	244 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	GRTP1	Q5TC63	336 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	C3orf33	Q6P1S2	294 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	FAHD2B	Q6P2I3	314 aa	Predicted RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	KLC3	Q6P597	504 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	MTERF4	Q7Z6M4	381 aa	Known RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ZBED8	Q8IZ13	594 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	CENPL	Q8N0S6	344 aa	Predicted RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	BOLL	Q8N9W6	283 aa	Known RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ATP6V1C2	Q8NEY4	427 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	OR4F6	Q8NGB9	312 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	OR6Y1	Q8NGX8	325 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	CLDND2	Q8NHS1	167 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	GPR151	Q8TDV0	419 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PIK3R3	Q92569	461 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	HOXB13	Q92826	284 aa	Predicted RBP	6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	ELP4	Q96EB1	424 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	FAHD2A	Q96GK7	314 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	SLC6A7	Q99884	636 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	PKP2	Q99959	881 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	KLHDC3	Q9BQ90	382 aa		6.53	□□□□□ -1.36
VPS45-210	ENST00000497638	KATNB1	Q9BVA0	655 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms