RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PCDHGB5Q9Y5G0 923 aa12.81□□□□□ -0.36
VPS26A-209ENST00000497564 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
VPS26A-209ENST00000497564 SPIN1Q9Y657 262 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-209ENST00000497564 MED12Q93074 2177 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 ZIC3O60481 467 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 F10P00742 488 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 BGLAPP02818 100 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SP1P08047 785 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 IGFBP1P08833 259 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 TSPAN19P0C672 248 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 CD46P15529 392 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 FUT1P19526 365 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 POU1F1P28069 291 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 GIPRP48546 466 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SMSP52788 366 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 TPD52P55327 224 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 FXYD6P3P58550 94 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 CDC42P60953 191 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 RPS4XP62701 263 aaKnown RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SELENBP1Q13228 472 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 ZBED5Q49AG3 693 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 FAM69AQ5T7M9 428 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 C1orf140Q5VVS0 124 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SLC27A4Q6P1M0 643 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SMARCD3Q6STE5 483 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 OAFQ86UD1 273 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 OR13C2Q8NGS9 318 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SLC25A43Q8WUT9 341 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 TAAR8Q969N4 342 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 GNRHR2Q96P88 292 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 NPAS1Q99742 590 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 YTHDF1Q9BYJ9 559 aaKnown RBP12.8□□□□□ -0.36
VPS26A-209ENST00000497564 POTEKPQ9BYX7 375 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 OR2B2Q9GZK3 357 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 EGLN3Q9H6Z9 239 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SERINC1Q9NRX5 453 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 SHANK1Q9Y566 2161 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 PTPN13Q12923 2485 aa12.8□□□□□ -0.36
VPS26A-209ENST00000497564 ZC3H12DA2A288 527 aaKnown RBP12.79□□□□□ -0.36
VPS26A-209ENST00000497564 OR2T1O43869 369 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 EFNA2O43921 213 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 MPZL2O60487 215 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 AHSA1O95433 338 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 CH25HO95992 272 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 ASAH2BP0C7U1 165 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 HK1P19367 917 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 TNFSF10P50591 281 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 ARG2P78540 354 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 FOXK1P85037 733 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 MYBPC1Q00872 1141 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 LTBQ06643 244 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 CD47Q08722 323 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 GINS1Q14691 196 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 MAD2L1BPQ15013 274 aaPredicted RBP12.79□□□□□ -0.36
VPS26A-209ENST00000497564 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 C3orf33Q6P1S2 294 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 POMZP3Q6PJE2 187 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 ENTHD1Q8IYW4 607 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 TMEM178AQ8NBL3 297 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 TRUB1Q8WWH5 349 aaKnown RBP12.79□□□□□ -0.36
VPS26A-209ENST00000497564 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 SAMD8Q96LT4 415 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 JSRP1Q96MG2 331 aaPredicted RBP12.79□□□□□ -0.36
VPS26A-209ENST00000497564 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 TSSK6Q9BXA6 273 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 PRRG3Q9BZD7 231 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 MCCC2Q9HCC0 563 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 NANSQ9NR45 359 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
VPS26A-209ENST00000497564 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 UTP20O75691 2785 aaKnown RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 MAGEA13PA6NCF6 341 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 FTCDNL1E5RQL4 147 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 KLRC4-KLRK1H3BQV0 150 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 GLSO94925 669 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 NDUFB2O95178 105 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 TNFAIP8O95379 198 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 BMP7P18075 431 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 GABRB1P18505 474 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 CCNA2P20248 432 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 GRK5P34947 590 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 RPS5P46782 204 aaKnown RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 PRPS1P60891 318 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 GPR85P60893 370 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 CXCR4P61073 352 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 SNRPGP62308 76 aaKnown RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 EFNB1P98172 346 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms