RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 RGS1Q08116 209 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 PUDPQ08623 228 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 CUL1Q13616 776 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 SLC5A12Q1EHB4 618 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 KLHL38Q2WGJ6 581 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 HIKESHIQ53FT3 197 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 AGBL2Q5U5Z8 902 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 LIPNQ5VXI9 398 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 WSCD1Q658N2 575 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 CGB2Q6NT52 195 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 FAHD2BQ6P2I3 314 aaPredicted RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 APTXQ7Z2E3 356 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 TRIM69Q86WT6 500 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 OR2L3Q8NG85 312 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 OR4K14Q8NGD5 310 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 SUN5Q8TC36 379 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 FAHD2AQ96GK7 314 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 PPP1R16AQ96I34 528 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 NOL4LQ96MY1 436 aaPredicted RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 SLC38A2Q96QD8 506 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 IL4I1Q96RQ9 567 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 SLC6A7Q99884 636 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 NIPSNAP3BQ9BS92 247 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 RAB34Q9BZG1 259 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 OPN3Q9H1Y3 402 aaPredicted RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 EXOSC3Q9NQT5 275 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 POLE4Q9NR33 117 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 AGPAT3Q9NRZ7 376 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 NUDT15Q9NV35 164 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 LYARQ9NX58 379 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 IMPAD1Q9NX62 359 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 SIGLEC8Q9NYZ4 499 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 CHMP5Q9NZZ3 219 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 ZNF221Q9UK13 617 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 L3MBTL1Q9Y468 752 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 CSDC2Q9Y534 153 aaKnown RBP2.8□□□□□ -1.96
CLK1-214ENST00000496205 TIMM10BQ9Y5J6 103 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 ALG6Q9Y672 507 aa2.8□□□□□ -1.96
CLK1-214ENST00000496205 LRP5LA4QPB2 252 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 H3BMQ9 156 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 NOL4O94818 638 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 TGM6O95932 706 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 ATP1B2P14415 290 aaPredicted RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 NCK1P16333 377 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 ZNF24P17028 368 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 IGHV1-2P23083 117 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 MMP11P24347 488 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 ATP5A1P25705 553 aaKnown RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 PRDX3P30048 256 aaKnown RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 ACLYP53396 1101 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 CLDN18P56856 261 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 KLRB1Q12918 225 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 C1orf61Q13536 156 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 LAGE3Q14657 143 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 USF2Q15853 346 aaPredicted RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 CYP51A1Q16850 503 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 TIMM50Q3ZCQ8 353 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 METTL11BQ5VVY1 283 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 ERICH5Q6P6B1 374 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 TMEM220Q6QAJ8 160 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 DHDDSQ86SQ9 333 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 HPS6Q86YV9 775 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 C9orf40Q8IXQ3 194 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 SYCE1Q8N0S2 351 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 FAM58AQ8N1B3 248 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 TCAIMQ8N3R3 496 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 FBXL16Q8N461 479 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 PQLC3Q8N755 202 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 KLHL30-AS1Q8NEE0 82 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 OR2L2Q8NH16 312 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 MAGEE2Q8TD90 523 aaPredicted RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 VN1R17PQ8TDU5 208 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 AGAP11Q8TF27 550 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 RAB1CQ92928 201 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 BADQ92934 168 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 TMEM80Q96HE8 168 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 FOXN4Q96NZ1 517 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 TECTBQ96PL2 329 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 MTMR9Q96QG7 549 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 PAIP2Q9BPZ3 127 aaKnown RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 APOL2Q9BQE5 337 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 RIOK1Q9BRS2 568 aaKnown RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 NXF5Q9H1B4 397 aaKnown RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 GLIPR2Q9H4G4 154 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 ANKRD19PQ9H560 264 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 ELOVL6Q9H5J4 265 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 RANBP3Q9H6Z4 567 aaPredicted RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 NIPAL2Q9H841 368 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 SLC17A5Q9NRA2 495 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 PNO1Q9NRX1 252 aaKnown RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 PAK1IP1Q9NWT1 392 aaPredicted RBP2.79□□□□□ -1.96
CLK1-214ENST00000496205 EHFQ9NZC4 300 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 PITPNC1Q9UKF7 332 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 VANGL2Q9ULK5 521 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 STARD10Q9Y365 291 aa2.79□□□□□ -1.96
CLK1-214ENST00000496205 USP6P35125 1406 aa2.78□□□□□ -1.96
CLK1-214ENST00000496205 INSRP06213 1382 aa2.78□□□□□ -1.96
CLK1-214ENST00000496205 A0A1B0GUH1 482 aa2.78□□□□□ -1.96
CLK1-214ENST00000496205 A0A1W2PPV4 95 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms