RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 C3orf18Q9UK00 162 aa2.57□□□□□ -2
PTCD3-218ENST00000493430 ZNF223Q9UK11 482 aaPredicted RBP2.57□□□□□ -2
PTCD3-218ENST00000493430 FBXO5Q9UKT4 447 aa2.57□□□□□ -2
PTCD3-218ENST00000493430 SNX12Q9UMY4 172 aa2.57□□□□□ -2
PTCD3-218ENST00000493430 EXO1Q9UQ84 846 aaKnown RBP2.57□□□□□ -2
PTCD3-218ENST00000493430 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.57□□□□□ -2
PTCD3-218ENST00000493430 COLEC10Q9Y6Z7 277 aa2.57□□□□□ -2
PTCD3-218ENST00000493430 FBN2P35556 2912 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CADP27708 2225 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 RTTNQ86VV8 2226 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 A0A1B0GX78 115 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 A0A1W2PPR1 153 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 KLLNB2CW77 178 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 IDSB3KWA1 339 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 GPR89AB7ZAQ6 455 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 UBXN8O00124 270 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CLDN4O14493 209 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ZW10O43264 779 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 OR1F1O43749 312 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CEACAM4O75871 244 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TSPAN9O75954 239 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 SIX3O95343 332 aaPredicted RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 WISP3O95389 354 aaPredicted RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 ETHE1O95571 254 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 WDPCPO95876 746 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 GBAP04062 536 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CLEC3BP05452 202 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 GPR89BP0CG08 455 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 PRG2P13727 222 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 OGNP20774 298 aaKnown RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 RPS3P23396 243 aaKnown RBP eCLIP2.56□□□□□ -2
PTCD3-218ENST00000493430 OPRL1P41146 370 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CETN2P41208 172 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 XCR1P46094 333 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TTPAP49638 278 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TDGF1P3P51864 188 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 PAX9P55771 341 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 GPX6P59796 221 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 DCDP81605 110 aaKnown RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 DDX39BQ13838 428 aaKnown RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 TMED2Q15363 201 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 MED22Q15528 200 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 UAP1Q16222 522 aaPredicted RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 NNATQ16517 81 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 DEFB134Q4QY38 66 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 KLHL26Q53HC5 615 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 RHBDD2Q6NTF9 364 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 AGTRAPQ6RW13 159 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 UNC5DQ6UXZ4 953 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 SYT10Q6XYQ8 523 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 BZW1Q7L1Q6 419 aaKnown RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 NLRP9Q7RTR0 991 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CPLX4Q7Z7G2 160 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 LINC00523Q86TU6 105 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 OR4N5Q8IXE1 308 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TBC1D21Q8IYX1 336 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ZBED8Q8IZ13 594 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 OR9A1PQ8NGU1 263 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 OR2Y1Q8NGV0 311 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 RNF128Q8TEB7 428 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 KCTD4Q8WVF5 259 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ASZ1Q8WWH4 475 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 NEIL2Q969S2 332 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.56□□□□□ -2
PTCD3-218ENST00000493430 VPS39Q96JC1 886 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 OR2A5Q96R48 311 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 VN1R1Q9GZP7 353 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 IL22Q9GZX6 179 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ILKAPQ9H0C8 392 aaPredicted RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 ANKRA2Q9H9E1 313 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 FANCEQ9HB96 536 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 HOMER3Q9NSC5 361 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 BFARQ9NZS9 450 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 C5AR2Q9P296 337 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 GIMAP2Q9UG22 337 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TRMT6Q9UJA5 497 aaKnown RBP2.56□□□□□ -2
PTCD3-218ENST00000493430 ANAPC5Q9UJX4 755 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 GRID1Q9ULK0 1009 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 PLCL2Q9UPR0 1127 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 SLC22A14Q9Y267 594 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 NAALAD2Q9Y3Q0 740 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 CMAHPQ9Y471 501 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ANGPTL3Q9Y5C1 460 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 LYVE1Q9Y5Y7 322 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TEX264Q9Y6I9 313 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 UNC79Q9P2D8 2635 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 TEX15Q9BXT5 2789 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ARHGAP32A7KAX9 2087 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ARFGEF3Q5TH69 2177 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ROS1P08922 2347 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 NAV3Q8IVL0 2385 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 ACANP16112 2415 aa2.56□□□□□ -2
PTCD3-218ENST00000493430 LRBAP50851 2863 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 IGHV1-45A0A0A0MS14 117 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 hCG_1807616A0A1W2PRN6 198 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TCRBV9S1A1TA0A576 114 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 GLOD5A6NK44 160 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 VSTM2BA6NLU5 285 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 C15orf61A6NNL5 157 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms