RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 HIF3AQ9Y2N7 669 aa18.83■□□□□ 0.61
SND1-214ENST00000489417 FTCDNL1E5RQL4 147 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 K7ENP7 123 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 MPZL2O60487 215 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 TRAPPC6AO75865 159 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 GABRB1P18505 474 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 CLK1P49759 484 aaKnown RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 B3GALT5-AS1P59052 145 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 PRPS1P60891 318 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 GXYLT1Q4G148 440 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 LAIR2Q6ISS4 152 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 INO80CQ6PI98 192 aaPredicted RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 PTCHD4Q6ZW05 846 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 YRDCQ86U90 279 aaKnown RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 MFSD8Q8NHS3 518 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 SLC39A7Q92504 469 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 HDAC2Q92769 488 aaKnown RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 SLC38A2Q96QD8 506 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 POLDIP3Q9BY77 421 aaKnown RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 YTHDF1Q9BYJ9 559 aaKnown RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 TMEM185BQ9H7F4 350 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 AASSQ9UDR5 926 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 BAIAP2Q9UQB8 552 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 PCDHGA9Q9Y5G4 932 aaKnown RBP18.83■□□□□ 0.6
SND1-214ENST00000489417 CSAG2Q9Y5P2 127 aa18.83■□□□□ 0.6
SND1-214ENST00000489417 SPTBN2O15020 2390 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 DCHS1Q96JQ0 3298 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 BHLHE40O14503 412 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 GLSO94925 669 aaPredicted RBP18.82■□□□□ 0.6
SND1-214ENST00000489417 HMGN1P05114 100 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 IMPDH2P12268 514 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 GRPRP30550 384 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 UQCRC1P31930 480 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 RFC3P40938 356 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 AQP2P41181 271 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 PCYT1AP49585 367 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 TEKQ02763 1124 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 MFSD13AQ14CX5 517 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 SNAPC1Q16533 368 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 SLC6A19Q695T7 634 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 LNX2Q8N448 690 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 MOSPD2Q8NHP6 518 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 APH1BQ8WW43 257 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 TRUB1Q8WWH5 349 aaKnown RBP18.82■□□□□ 0.6
SND1-214ENST00000489417 TM9SF4Q92544 642 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 TAPBPLQ9BX59 468 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 ASPNQ9BXN1 380 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 NDEL1Q9GZM8 345 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 ZNF696Q9H7X3 374 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 RAXQ9Y2V3 346 aa18.82■□□□□ 0.6
SND1-214ENST00000489417 TRAV17A0A0B4J275 112 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 FAM166BA8MTA8 275 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 BLOC1S5-TXNDC5H3BN57 136 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 WBP4O75554 376 aaKnown RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 PPP1R3DO95685 299 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 HPNP05981 417 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 TSPAN19P0C672 248 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 SHC1P29353 583 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 SFTPDP35247 375 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 UCNP55089 124 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 SNRPGP62308 76 aaKnown RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 MYBPHQ13203 477 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 TOP3AQ13472 1001 aaPredicted RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 OR7A5Q15622 319 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 SGCBQ16585 318 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 HYAL4Q2M3T9 481 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 WIPI1Q5MNZ9 446 aaPredicted RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 RBM48Q5RL73 367 aaKnown RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 CCDC103Q8IW40 242 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 TCEANCQ8N8B7 351 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 ZFP62Q8NB50 900 aaPredicted RBP18.81■□□□□ 0.6
SND1-214ENST00000489417 OR8J1Q8NGP2 316 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 OR5J2Q8NH18 312 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 SFXN2Q96NB2 322 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 IL4I1Q96RQ9 567 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 HDGFL3Q9Y3E1 203 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 CORINQ9Y5Q5 1042 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 FREM2Q5SZK8 3169 aa18.81■□□□□ 0.6
SND1-214ENST00000489417 LIPT2A6NK58 231 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 MCIDASD6RGH6 385 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 SURF4O15260 269 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 OPN1LWP04000 364 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 GTF2E2P29084 291 aaKnown RBP18.8■□□□□ 0.6
SND1-214ENST00000489417 FMO3P31513 532 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 RPL4P36578 427 aaKnown RBP18.8■□□□□ 0.6
SND1-214ENST00000489417 RPL18Q07020 188 aaKnown RBP18.8■□□□□ 0.6
SND1-214ENST00000489417 TMEM176BQ3YBM2 270 aaPredicted RBP18.8■□□□□ 0.6
SND1-214ENST00000489417 BORAQ6PGQ7 559 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 DPY19L2P2Q6ZN68 376 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 IGFN1Q86VF2 1251 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 ZADH2Q8N4Q0 377 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 TMEM251Q8N6I4 163 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 LRRC75AQ8NAA5 344 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 OR5B2Q96R09 309 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 GPX7Q96SL4 187 aaPredicted RBP18.8■□□□□ 0.6
SND1-214ENST00000489417 ALKBH4Q9NXW9 302 aa18.8■□□□□ 0.6
SND1-214ENST00000489417 MRPL39Q9NYK5 338 aaKnown RBP18.8■□□□□ 0.6
SND1-214ENST00000489417 EIF4E1BA6NMX2 242 aaKnown RBP18.79■□□□□ 0.6
SND1-214ENST00000489417 M0R082 166 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms