RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SLC35A1P78382 337 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 POU6F2P78424 691 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-233ENST00000489352 SLC17A1Q14916 467 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 KLHL26Q53HC5 615 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 TTC27Q6P3X3 843 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 BTNL3Q6UXE8 466 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 BRD3OSQ6XYD6 125 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 C1orf174Q8IYL3 243 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 SSMEM1Q8WWF3 244 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 TMEM45BQ96B21 275 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 C16orf58Q96GQ5 468 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 AMDHD1Q96NU7 426 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 THUMPD3Q9BV44 507 aaKnown RBP9.75□□□□□ -0.85
HDAC6-233ENST00000489352 NMUR2Q9GZQ4 415 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 PRDM13Q9H4Q3 707 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 SAP30LQ9HAJ7 183 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 GRHL1Q9NZI5 618 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 TAAR3PQ9P1P4 343 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 TMEM181Q9P2C4 612 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 CPSF2Q9P2I0 782 aaKnown RBP9.75□□□□□ -0.85
HDAC6-233ENST00000489352 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 GPR137BO60478 399 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 MT-ND5P03915 603 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 PPIAL4GP0DN37 164 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 UBL4AP11441 157 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 LSP1P33241 339 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 APOBEC1P41238 236 aaKnown RBP9.74□□□□□ -0.85
HDAC6-233ENST00000489352 ASMTP46597 345 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 SESN3P58005 492 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 ACSM2AQ08AH3 577 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 DBPQ10586 325 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-233ENST00000489352 BST1Q10588 318 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 HSPB3Q12988 150 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 CDK5R2Q13319 367 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 FRG1Q14331 258 aaKnown RBP9.74□□□□□ -0.85
HDAC6-233ENST00000489352 HERPUD1Q15011 391 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 PPP1R7Q15435 360 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 MSMPQ1L6U9 139 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 DMRTC1Q5HYR2 192 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 STEAP4Q687X5 459 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 ACSM2BQ68CK6 577 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 METTL2BQ6P1Q9 378 aaKnown RBP9.74□□□□□ -0.85
HDAC6-233ENST00000489352 CCDC137Q6PK04 289 aaKnown RBP9.74□□□□□ -0.85
HDAC6-233ENST00000489352 GPAT4Q86UL3 456 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 KLHL36Q8N4N3 616 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF563Q8TA94 476 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 ELMOD3Q96FG2 381 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 ALKBH3Q96Q83 286 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-233ENST00000489352 CENPHQ9H3R5 247 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 SERHL2Q9H4I8 314 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 RNF14Q9UBS8 474 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 CHRNA9Q9UGM1 479 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 TRAPPC4Q9Y296 219 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 U3KQK5 164 aa9.74□□□□□ -0.85
HDAC6-233ENST00000489352 PCLOQ9Y6V0 5065 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 LCE6AA0A183 80 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 SLC22A23A1A5C7 686 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 H0YL77 283 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 ETV2O00321 342 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-233ENST00000489352 ANKRD28O15084 1053 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 MELTFP08582 738 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 ANXA4P09525 319 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-233ENST00000489352 SBK2P0C263 348 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 ACP2P11117 423 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 BCKDHAP12694 445 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 IVDP26440 423 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 GSTM5P46439 218 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 CLK1P49759 484 aaKnown RBP9.73□□□□□ -0.85
HDAC6-233ENST00000489352 BPIFB3P59826 476 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 EGR3Q06889 387 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 DUSP5Q16690 384 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 TSTQ16762 297 aaKnown RBP9.73□□□□□ -0.85
HDAC6-233ENST00000489352 SPIN4Q56A73 249 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 TTMPQ5BVD1 217 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 CASC10Q5T4H9 136 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 GPR157Q5UAW9 335 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 CDC73Q6P1J9 531 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 LRRN1Q6UXK5 716 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 GDPGP1Q6ZNW5 385 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 MDP1Q86V88 176 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 ANKMY2Q8IV38 441 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 CCDC36Q8IYA8 594 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 OR4F6Q8NGB9 312 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 RHEBL1Q8TAI7 183 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 GRK7Q8WTQ7 553 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 CDKL2Q92772 493 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 GPR22Q99680 433 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 BTBD2Q9BX70 525 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 EBPLQ9BY08 206 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 LAT2Q9GZY6 243 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 NPHS2Q9NP85 383 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 GAR1Q9NY12 217 aaKnown RBP9.73□□□□□ -0.85
HDAC6-233ENST00000489352 NKIRAS2Q9NYR9 191 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 IL20RAQ9UHF4 553 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-233ENST00000489352 DTNAQ9Y4J8 743 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 CACNG2Q9Y698 323 aa9.73□□□□□ -0.85
HDAC6-233ENST00000489352 PIAS1O75925 651 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 TGDSO95455 350 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms