RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CPMP14384 443 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PORP16435 677 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ZNF708P17019 499 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 DRD5P21918 477 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 GPX3P22352 226 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CRYGSP22914 178 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CRABP2P29373 138 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SSTR1P30872 391 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SRD5A2P31213 254 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CD79BP40259 229 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PTGDSP41222 190 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PPICP45877 212 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SRYQ05066 204 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 BCL2A1Q16548 175 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ACKR1Q16570 336 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 C10orf62Q5T681 223 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 GRTP1Q5TC63 336 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 C6orf163Q5TEZ5 329 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 OR2A2Q6IF42 318 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 LIN54Q6MZP7 749 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 C3orf62Q6ZUJ4 267 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 RAPH1Q70E73 1250 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CCDC91Q7Z6B0 441 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 LUZP2Q86TE4 346 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TBC1D1Q86TI0 1168 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 YRDCQ86U90 279 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 IFNEQ86WN2 208 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 NUDT13Q86X67 352 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 MYLK4Q86YV6 388 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PLCZ1Q86YW0 608 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 KLHL7Q8IXQ5 586 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PRR22Q8IZ63 422 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TEX9Q8N6V9 391 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 WDSUB1Q8N9V3 476 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 OR14L1PQ8NHC6 308 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 RFWD2Q8NHY2 731 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 RHEBL1Q8TAI7 183 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 WDR20Q8TBZ3 569 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TRPC4APQ8TEL6 797 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SLC44A1Q8WWI5 657 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 EXT2Q93063 718 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 HGDQ93099 445 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 STARD4Q96DR4 205 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 WFIKKN1Q96NZ8 548 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SERPINI1Q99574 410 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 LRRC1Q9BTT6 524 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 OSBPL11Q9BXB4 747 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 NXF5Q9H1B4 397 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ALG9Q9H6U8 611 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ACTR8Q9H981 624 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ZNF226Q9NYT6 803 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 AHSPQ9NZD4 102 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 KLRF1Q9NZS2 232 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CLCF1Q9UBD9 225 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ZNF639Q9UID6 485 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 GAB2Q9UQC2 676 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 DLGAP4Q9Y2H0 992 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ACOT9Q9Y305 439 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SNX24Q9Y343 169 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ANGPTL3Q9Y5C1 460 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 DNHD1Q96M86 4753 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 YLPM1P49750 1951 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 HEATR1Q9H583 2144 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 NUP214P35658 2090 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.52□□□□□ -1.854e-7■■■■□ 26.6
SNRNP40-205ENST00000486941 A0A1W2PNV4 684 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 C1orf226A1L170 272 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 OR6C70A6NIJ9 312 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 C16orf97H3BN30 126 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PLOD2O00469 737 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 EMC8O43402 210 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 HCRTR2O43614 444 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 ZIC3O60481 467 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 TMCC2O75069 709 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 UGT2B11O75310 529 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 REM1O75628 298 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 BCAS2O75934 225 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 KLHL2O95198 593 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CLDN9O95484 217 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 TGM6O95932 706 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GBAP04062 536 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 ATP1B1P05026 303 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 KLK1P06870 262 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GFAPP14136 432 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PAX1P15863 534 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CHN1P15882 459 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CSNK2A2P19784 350 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 NT5EP21589 574 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 DPP4P27487 766 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 DEKP35659 375 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 UGT2B10P36537 528 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PAFAH1B1P43034 410 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 STARP49675 285 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 EMDP50402 254 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 LHX2P50458 406 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CLDN18P56856 261 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GPX6P59796 221 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PSPHP78330 225 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PPP2R2BQ00005 443 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms