RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ERVK-25P63136 954 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 DBPQ10586 325 aaPredicted RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 CBFBQ13951 182 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 LPAL2Q16609 132 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 ZNF385CQ66K41 422 aaPredicted RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 OVCH1Q7RTY7 1134 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 PPP1R3BQ86XI6 285 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 MARCH9Q86YJ5 346 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 GALNT6Q8NCL4 622 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 MOSPD2Q8NHP6 518 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 ZNF524Q96C55 264 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 MOGAT1Q96PD6 335 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 CNN2Q99439 309 aaKnown RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 HDHD5Q9BXW7 423 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 CMAHPQ9Y471 501 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 SLC35F4A4IF30 521 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 BLOC1S5-TXNDC5H3BN57 136 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 FADS1O60427 444 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 RGS9O75916 674 aaPredicted RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 FOXL2P58012 376 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 PON3Q15166 354 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 APCDD1LQ8NCL9 501 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 NFAM1Q8NET5 270 aaPredicted RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 ZMYND19Q96E35 227 aaPredicted RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 DEPDC7Q96QD5 511 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 DDOQ99489 341 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 KLHDC3Q9BQ90 382 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 CCDC32Q9BV29 185 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 KCNN2Q9H2S1 579 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 PLEKHB1Q9UF11 243 aaPredicted RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 ZNF229Q9UJW7 825 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 PPIEQ9UNP9 301 aaKnown RBP18.54■□□□□ 0.56
HPS3-206ENST00000486530 BDP1A6H8Y1 2624 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 MYO15AQ9UKN7 3530 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 A0A1W2PQL4 384 aaPredicted RBP18.53■□□□□ 0.56
HPS3-206ENST00000486530 VSTM2BA6NLU5 285 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 AGRPO00253 132 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 CASKO14936 926 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 SYPP08247 313 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 CD14P08571 375 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 CXCR1P25024 350 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 AVPR2P30518 371 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 UQCRC1P31930 480 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 AQP2P41181 271 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 TGM4P49221 684 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 P2RX1P51575 399 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 DAB2P98082 770 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 IL10RAQ13651 578 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 EFR3AQ14156 821 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 ALG10Q5BKT4 473 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 STEAP3Q658P3 488 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 LRRC75AQ8NAA5 344 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 NEIL3Q8TAT5 605 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 NUBPLQ8TB37 319 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 ASB15Q8WXK1 588 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 RASD2Q96D21 266 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 C4orf36Q96KX1 117 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 DCLRE1CQ96SD1 692 aaKnown RBP18.53■□□□□ 0.56
HPS3-206ENST00000486530 NMNAT3Q96T66 252 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 NMNAT2Q9BZQ4 307 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 FKRPQ9H9S5 495 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 RHBDL2Q9NX52 303 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 PCDHGB7Q9Y5F8 929 aa18.53■□□□□ 0.56
HPS3-206ENST00000486530 IMPA2O14732 288 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 NUDT14O95848 222 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 OR2T7P0C7T2 308 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 GP1BBP13224 206 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 DIO1P49895 249 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 EMP2P54851 167 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 ACTA2P62736 377 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 ACTG2P63267 376 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 TRAM1Q15629 374 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.52■□□□□ 0.56
HPS3-206ENST00000486530 PHF19Q5T6S3 580 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 VASH1Q7L8A9 365 aaPredicted RBP18.52■□□□□ 0.56
HPS3-206ENST00000486530 FAM122BQ7Z309 247 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 NANOGNBQ7Z5D8 188 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 BPHLQ86WA6 291 aaPredicted RBP18.52■□□□□ 0.56
HPS3-206ENST00000486530 MISPQ8IVT2 679 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 LAX1Q8IWV1 398 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 OR2T27Q8NH04 317 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 KTI12Q96EK9 354 aaPredicted RBP18.52■□□□□ 0.56
HPS3-206ENST00000486530 GFM1Q96RP9 751 aaKnown RBP18.52■□□□□ 0.56
HPS3-206ENST00000486530 SMOC1Q9H4F8 434 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 ZMIZ1Q9ULJ6 1067 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 TRAPPC4Q9Y296 219 aa18.52■□□□□ 0.56
HPS3-206ENST00000486530 TEX13CA0A0J9YWL9 993 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 FUOMA2VDF0 154 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 SCO2O43819 266 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 SPI1P17947 270 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 GTF2E2P29084 291 aaKnown RBP18.52■□□□□ 0.55
HPS3-206ENST00000486530 DUSP3P51452 185 aaPredicted RBP18.52■□□□□ 0.55
HPS3-206ENST00000486530 LTBQ06643 244 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 ANGPT1Q15389 498 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 TMEM91Q6ZNR0 172 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 SLC22A16Q86VW1 577 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 JAZF1Q86VZ6 243 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 FAM83FQ8NEG4 500 aaPredicted RBP18.52■□□□□ 0.55
HPS3-206ENST00000486530 LPAR4Q99677 370 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 GTPBP2Q9BX10 602 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms