RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 PNPOQ9NVS9 261 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 ARGLU1Q9NWB6 273 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-215ENST00000484203 KLHL28Q9NXS3 571 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 P2RX2Q9UBL9 471 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 CHRNA9Q9UGM1 479 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 MKLN1Q9UL63 735 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 CORO2BQ9UQ03 480 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 TRAPPC4Q9Y296 219 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 IFT52Q9Y366 437 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 GPR45Q9Y5Y3 372 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 KCNE3Q9Y6H6 103 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 ZFHX3Q15911 3703 aa5.48□□□□□ -1.53
PTCD3-215ENST00000484203 NINQ8N4C6 2090 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 FLNAP21333 2647 aaKnown RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ACANP16112 2415 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 PHF3Q92576 2039 aaKnown RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 IGKV3D-15A0A087WSY6 115 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 A0A0G2JPF8 293 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 CFAP73A6NFT4 308 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 OR6C65A6NJZ3 312 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 DEFB108AA8MXU0 73 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 HNRNPCL2B2RXH8 293 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 HNRNPCL3B7ZW38 293 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 HMGN4O00479 90 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 POLR3GO15318 223 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 CYTIPO60759 359 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 HNRNPCL1O60812 293 aaKnown RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 H6PDO95479 791 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 PMS2P2O95744 297 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 HNRNPCL4P0DMR1 293 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TFPIP10646 304 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 CD53P19397 219 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 KLK2P20151 261 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 CFPP27918 469 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 EPHA3P29320 983 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 SLC1A3P43003 542 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 OR3A2P47893 321 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 MRPL19P49406 292 aaKnown RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 DIO1P49895 249 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 POLR2HP52434 150 aaKnown RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 UFM1P61960 85 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 SLC35A1P78382 337 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 NKX6-1P78426 367 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TGFBR3Q03167 851 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 FADDQ13158 208 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 BEND6Q5SZJ8 279 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 OR7E24Q6IFN5 339 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TYW3Q6IPR3 259 aaKnown RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ADAM5Q6NVV9 412 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TFAP2EQ6VUC0 442 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 FRRS1Q6ZNA5 592 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 PLEKHM3Q6ZWE6 761 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ZNF550Q7Z398 422 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ABHD12BQ7Z5M8 362 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 BIVMQ86UB2 503 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 RNF130Q86XS8 419 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TUSC5Q8IXB3 177 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ZNF100Q8IYN0 542 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 GABRG1Q8N1C3 465 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ATP6V1C2Q8NEY4 427 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 MGARPQ8TDB4 240 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 LRRC8CQ8TDW0 803 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ABHD3Q8WU67 409 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TMEM171Q8WVE6 324 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 STON2Q8WXE9 905 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 ROBO4Q8WZ75 1007 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 PIK3IP1Q96FE7 263 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 OR5B2Q96R09 309 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 CCL19Q99731 98 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 SIKE1Q9BRV8 207 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 NAA11Q9BSU3 229 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-215ENST00000484203 BDH2Q9BUT1 245 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 CCDC106Q9BWC9 280 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 EVA1AQ9H8M9 152 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 TMBIM4Q9HC24 238 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 FAIMQ9NVQ4 179 aa5.47□□□□□ -1.53
PTCD3-215ENST00000484203 NPIPA5A0A0B4J1W7 369 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-215ENST00000484203 TCRBV5S2A0A599 114 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 PRORSD1PA6NEY8 169 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 HMGB1P1B2RPK0 211 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-215ENST00000484203 NPIPA7E9PJI5 369 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 EFNA2O43921 213 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 DIAPH2O60879 1101 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 MRPL33O75394 65 aaKnown RBP5.46□□□□□ -1.54
PTCD3-215ENST00000484203 VAMP5O95183 116 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 OPN1LWP04000 364 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 GPIP06744 558 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 ALDOCP09972 364 aaKnown RBP5.46□□□□□ -1.54
PTCD3-215ENST00000484203 NPIPA8P0DM63 369 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 KITP10721 976 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 PAX1P15863 534 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 GGT1P19440 569 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 CXCR1P25024 350 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 CCKARP32238 428 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 RYKP34925 604 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 CRATP43155 626 aa5.46□□□□□ -1.54
PTCD3-215ENST00000484203 IDH2P48735 452 aaKnown RBP5.46□□□□□ -1.54
PTCD3-215ENST00000484203 POLR2JP52435 117 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms