RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PNPLA2Q96AD5 504 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 ARHGDIGQ99819 225 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 OR52D1Q9H346 318 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 PLEKHA1Q9HB21 404 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 ACTR10Q9NZ32 417 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 OPN4Q9UHM6 478 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 COL4A3Q01955 1670 aa13.17□□□□□ -0.3
COL9A2-207ENST00000482722 HMSDA8MTL9 139 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 MAN2B1O00754 1011 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 NARSO43776 548 aaKnown RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 AIFM1O95831 613 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 PDX1P52945 283 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 MC2RQ01718 297 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 ZNF85Q03923 595 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 ARHGAP19Q14CB8 494 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 DMKNQ6E0U4 476 aaPredicted RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 TEX19Q8NA77 164 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 COX14Q96I36 57 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 GPN1Q9HCN4 374 aaPredicted RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 C20orf141Q9NUB4 165 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 SLC6A5Q9Y345 797 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 ARPC4-TTLL3A0A0A6YYG9 625 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 TRAV1-2A0A0B4J238 106 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 C1QTNF3-AMACRE9PGA6 284 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 H7C2Y5 167 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 STX11O75558 287 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 ZNF35P13682 527 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 DRD3P35462 400 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 NRG3P56975 720 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 UBE2MP61081 183 aaKnown RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 PRDX1Q06830 199 aaKnown RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 DECR1Q16698 335 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 OR7E24Q6IFN5 339 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 RAB42Q8N4Z0 105 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 PFN4Q8NHR9 129 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 PCBD2Q9H0N5 130 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 MRPS30Q9NP92 439 aaKnown RBP13.16□□□□□ -0.3
COL9A2-207ENST00000482722 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
COL9A2-207ENST00000482722 NAP1L6A6NFF2 107 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 GABARAPH6UMI1 98 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 ITGA10O75578 1167 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 KRT33AO76009 404 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 GKN3PP0CG01 181 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 ERGP11308 486 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 TEAD1P28347 426 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 DCTDP32321 178 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 FXYD6P3P58550 94 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 TMEM52BQ4KMG9 183 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 ZNF613Q6PF04 617 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 MBOAT2Q6ZWT7 520 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 SSX6Q7RTT6 188 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 PXT1Q8NFP0 134 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 BPIFCQ8NFQ6 507 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 SFXN1Q9H9B4 322 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 COA4Q9NYJ1 87 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 KLHL9Q9P2J3 617 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 MLXQ9UH92 298 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 PLCL2Q9UPR0 1127 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 F8W036 122 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 SNAPC5O75971 98 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 UCHL1P09936 223 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 VSIG10L2P0DP72 767 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 PRG2P13727 222 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 TYRP1P17643 537 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
COL9A2-207ENST00000482722 TFF2Q03403 129 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 HYAL1Q12794 435 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 FAM74A1Q5RGS3 127 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 HES5Q5TA89 166 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 SHISA5Q8N114 240 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 FRMD1Q8N878 549 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 NUP43Q8NFH3 380 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 BRIX1Q8TDN6 353 aaKnown RBP13.15□□□□□ -0.3
COL9A2-207ENST00000482722 ZNF768Q9H5H4 540 aaKnown RBP13.15□□□□□ -0.3
COL9A2-207ENST00000482722 SYNPO2LQ9H987 977 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
COL9A2-207ENST00000482722 ERVK-19Q9WJR5 959 aa13.15□□□□□ -0.3
COL9A2-207ENST00000482722 CLEC3AO75596 197 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 TAS2R43P59537 309 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 AP3S2P59780 193 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 LGALS3BPQ08380 585 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 CSRP2Q16527 193 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 FAM199XQ6PEV8 388 aaPredicted RBP13.14□□□□□ -0.31
COL9A2-207ENST00000482722 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 THSD4Q6ZMP0 1018 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 ARL14Q8N4G2 192 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 SLC16A11Q8NCK7 471 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 FANK1Q8TC84 345 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 MS4A6EQ96DS6 147 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 TEAD3Q99594 435 aa13.14□□□□□ -0.31
COL9A2-207ENST00000482722 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms