RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
CHD3-210ENST00000479080 EGLN3Q9H6Z9 239 aa11.76□□□□□ -0.53
CHD3-210ENST00000479080 AP4B1Q9Y6B7 739 aa11.76□□□□□ -0.53
CHD3-210ENST00000479080 TLN1Q9Y490 2541 aaKnown RBP11.76□□□□□ -0.53
CHD3-210ENST00000479080 EFCAB9A8MZ26 197 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 AQP7O14520 342 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 TNFSF11O14788 317 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 HCN1O60741 890 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 SOX14O95416 240 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 AHSA1O95433 338 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 SNAP29O95721 258 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 TFPIP10646 304 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 IGFBP5P24593 272 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 GRPRP30550 384 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 UQCRC1P31930 480 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 IDUAP35475 653 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 MAP2K6P52564 334 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 OR7A5Q15622 319 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 FAM69AQ5T7M9 428 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 NHLRC1Q6VVB1 395 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 ZNF620Q6ZNG0 422 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 TMPPEQ6ZT21 453 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 WDFY1Q8IWB7 410 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 UBQLNLQ8IYU4 475 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 LINC00471Q8N535 108 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 PACRGLQ8N7B6 248 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 MOSPD2Q8NHP6 518 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 MFSD8Q8NHS3 518 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 ABTB1Q969K4 478 aaPredicted RBP11.75□□□□□ -0.53
CHD3-210ENST00000479080 WBP1Q96G27 269 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 ZNF845Q96IR2 970 aaPredicted RBP11.75□□□□□ -0.53
CHD3-210ENST00000479080 TNFRSF13CQ96RJ3 184 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 RBM4BQ9BQ04 359 aaKnown RBP11.75□□□□□ -0.53
CHD3-210ENST00000479080 SLX1AQ9BQ83 275 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 RBM4Q9BWF3 364 aaKnown RBP11.75□□□□□ -0.53
CHD3-210ENST00000479080 GABARAPL3Q9BY60 117 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 KLHL4Q9C0H6 718 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 FKRPQ9H9S5 495 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 SERINC1Q9NRX5 453 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 ASF1BQ9NVP2 202 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 SIGLEC7Q9Y286 467 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 TMEM5Q9Y2B1 443 aa11.75□□□□□ -0.53
CHD3-210ENST00000479080 FREM3P0C091 2139 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 A0A1B0GTH9 108 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 UNC119BA6NIH7 251 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 M0R082 166 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 EIF1AYO14602 144 aaKnown RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 CXCL13O43927 109 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 PMS2P2O95744 297 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 ACTL6AO96019 429 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 VHLP40337 213 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 CLK1P49759 484 aaKnown RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 DIO1P49895 249 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.74□□□□□ -0.53
CHD3-210ENST00000479080 ZIK1Q3SY52 487 aaPredicted RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 EMC4Q5J8M3 183 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 C5orf46Q6UWT4 87 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 IZUMO2Q6UXV1 221 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 RASSF6Q6ZTQ3 369 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 TEX19Q8NA77 164 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 OR4Q3Q8NH05 313 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 OR2V1Q8NHB1 315 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 ZNF417Q8TAU3 575 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 SLC25A36Q96CQ1 311 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 BBC3Q96PG8 261 aaPredicted RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 UCN2Q96RP3 112 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 ZNF587Q96SQ5 575 aaPredicted RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 PRDM14Q9GZV8 571 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 TOR3AQ9H497 397 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 KRT84Q9NSB2 600 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 TAS2R5Q9NYW4 299 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 B3GAT1Q9P2W7 334 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 IL20RAQ9UHF4 553 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 ZNF229Q9UJW7 825 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 POFUT2Q9Y2G5 429 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 HIF3AQ9Y2N7 669 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 HDGFL3Q9Y3E1 203 aa11.74□□□□□ -0.53
CHD3-210ENST00000479080 SPIN1Q9Y657 262 aaPredicted RBP11.74□□□□□ -0.53
CHD3-210ENST00000479080 IGHV3-15A0A0B4J1V0 119 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 MCIDASD6RGH6 385 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 MS4A18H0YCH9 400 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 LINC01387J3KSC0 135 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 SMAD9O15198 467 aaKnown RBP11.73□□□□□ -0.53
CHD3-210ENST00000479080 AKR7A3O95154 331 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 CRYABP02511 175 aaKnown RBP11.73□□□□□ -0.53
CHD3-210ENST00000479080 OSMP13725 252 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 CPN1P15169 458 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 AQP2P41181 271 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 ARHGDIAP52565 204 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 OR2B6P58173 313 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 H3F3AP84243 136 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 SGCBQ16585 318 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 MS4A18Q3C1V0 323 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 SLC36A3Q495N2 470 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 FAM180AQ6UWF9 173 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms