RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 PLK5Q496M5 336 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 RPL22L1Q6P5R6 122 aaKnown RBP13.14□□□□□ -0.31
NPHP4-208ENST00000478423 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 MARCH3Q86UD3 253 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 SPEM1Q8N4L4 309 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 OR7G1Q8NGA0 311 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 LRRC20Q8TCA0 184 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 CHST8Q9H2A9 424 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 RDH8Q9NYR8 311 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 RABL2AQ9UBK7 228 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-208ENST00000478423 RABL2BQ9UNT1 228 aa13.14□□□□□ -0.31
NPHP4-208ENST00000478423 A0A1B0GVG6 124 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 UPK1AO00322 258 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ALOX12BO75342 701 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CD79AP11912 226 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CD1EP15812 388 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CAPZBP47756 277 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 FGL2Q14314 439 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 P2RY14Q15391 338 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 PARP16Q8N5Y8 322 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CCDC74AQ96AQ1 378 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ELF4Q99607 663 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 THAP7Q9BT49 309 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CFHR5Q9BXR6 569 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF350Q9GZX5 532 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SLC6A13Q9NSD5 602 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SCG5P05408 212 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 IGFBP1P08833 259 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 AKR1D1P51857 326 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 RPS25P62851 125 aaKnown RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SIRPAP78324 504 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 DCDC5Q6ZRR9 648 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 MISPQ8IVT2 679 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ETFBKMTQ8IXQ9 262 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ADAMTS14Q8WXS8 1223 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 NDRG4Q9ULP0 352 aaKnown RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 NEU3Q9UQ49 428 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 HIF3AQ9Y2N7 669 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 IDSB3KWA1 339 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SEC14L2O76054 403 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 HTR3BO95264 441 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 WDPCPO95876 746 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SMIM18P0DKX4 95 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 PCSK6P29122 969 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 HTR1FP30939 366 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 RUNX2Q13950 521 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 POU2F3Q9UKI9 436 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ALG5Q9Y673 324 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 TSPAN11A1L157 253 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 METTL15A6NJ78 407 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 YKT6O15498 198 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 GABARAPO95166 117 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 GNRHRP30968 328 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 SPOCK1Q08629 439 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 KIAA0040Q15053 153 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 HYAL4Q2M3T9 481 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 PRSS36Q5K4E3 855 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 C6orf183Q5T699 404 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ASCC1Q8N9N2 400 aaKnown RBP13.13□□□□□ -0.31
NPHP4-208ENST00000478423 OR52I1Q8NGK6 324 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 OR5D14Q8NGL3 314 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF281Q9Y2X9 895 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 ASB4Q9Y574 426 aa13.13□□□□□ -0.31
NPHP4-208ENST00000478423 MEN1O00255 615 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 THBS1P07996 1170 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 IL7P13232 177 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 TCN2P20062 427 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 NPR2P20594 1047 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 DPP4P27487 766 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 DRD3P35462 400 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 SYT14P1Q58G82 188 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 CMIPQ8IY22 773 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 SIMC1Q8NDZ2 872 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 RADILQ96JH8 1075 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 CORINQ9Y5Q5 1042 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ICE1Q9Y2F5 2266 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 SRCAPQ6ZRS2 3230 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 PRKNO60260 465 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 RAB3DO95716 219 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ARSBP15848 533 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 AKR1C4P17516 323 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 RAB3AP20336 220 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms