RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CHP2O43745 196 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 CYTIPO60759 359 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 UBOX5O94941 541 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 CGAP01215 116 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 GPIP06744 558 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 PNMTP11086 282 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 COX6B1P14854 86 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 YAP1P46937 504 aaKnown RBP9.14□□□□□ -0.95
HDAC6-222ENST00000478095 TAS2R41P59536 307 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SLC35A1P78382 337 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SAMD4BQ5PRF9 694 aaKnown RBP9.14□□□□□ -0.95
HDAC6-222ENST00000478095 TMEM201Q5SNT2 666 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 OTUD3Q5T2D3 398 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF613Q6PF04 617 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF474Q6S9Z5 364 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-222ENST00000478095 FKBP9P1Q75LS8 142 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 CBLL1Q75N03 491 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 NUFIP2Q7Z417 695 aaKnown RBP9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SLC43A2Q8N370 569 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 FAM86B1Q8N7N1 296 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 TMEM99Q8N816 258 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF610Q8N9Z0 462 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 STK35Q8TDR2 534 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 LZICQ8WZA0 190 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 RNASE6Q93091 150 aaKnown RBP9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SLC38A4Q969I6 547 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SLC41A3Q96GZ6 507 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 PCDHAC1Q9H158 963 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 C12orf10Q9HB07 376 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 GLRX2Q9NS18 164 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 KLHL9Q9P2J3 617 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SEC14L4Q9UDX3 406 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 CD300AQ9UGN4 299 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 PRDM4Q9UKN5 801 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 TRAPPC4Q9Y296 219 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 SNX13Q9Y5W8 968 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 ICE1Q9Y2F5 2266 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 ASH1LQ9NR48 2969 aaKnown RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 TRAPPC13A5PLN9 417 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF716A6NP11 495 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 A8MXE2 369 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 FTCDNL1E5RQL4 147 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 LRRN3E7EW58 273 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 J3KTA2 159 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 MSTNO14793 375 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 ARPC2O15144 300 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 DNPH1O43598 174 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 EIF1BO60739 113 aaKnown RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 GMNNO75496 209 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 PDE5AO76074 875 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 LYPD3O95274 346 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 YES1P07947 543 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 CD8BP10966 210 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 HSD17B1P14061 328 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 IGFBP2P18065 325 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 EDNRAP25101 427 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 GTF2E2P29084 291 aaKnown RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 PIN1Q13526 163 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 FBXL19-AS1Q494R0 122 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 IFI44LQ53G44 452 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 EEF1A1P5Q5VTE0 462 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 PAQR6Q6TCH4 344 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 GDF7Q7Z4P5 450 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 C10orf53Q8N6V4 93 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 PIGXQ8TBF5 258 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 GEMIN6Q8WXD5 167 aaKnown RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 TAAR8Q969N4 342 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 LRRC46Q96FV0 321 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 NAA11Q9BSU3 229 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 AMBRA1Q9C0C7 1298 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 BCO1Q9HAY6 547 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 C6orf203Q9P0P8 240 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 RHCGQ9UBD6 479 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 MAGEL2Q9UJ55 1249 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 HEATR5AQ86XA9 2040 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 SPTBN1Q01082 2364 aaKnown RBP9.13□□□□□ -0.95
HDAC6-222ENST00000478095 PCNX1Q96RV3 2341 aa9.13□□□□□ -0.95
HDAC6-222ENST00000478095 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
HDAC6-222ENST00000478095 UTP20O75691 2785 aaKnown RBP9.12□□□□□ -0.95
HDAC6-222ENST00000478095 TRAV36DV7A0A075B6V5 113 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 AQP7P3A6NL99 342 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 IGHV3-9P01782 118 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 IFNW1P05000 195 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 FUT4P22083 530 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 H3F3AP84243 136 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 LTBQ06643 244 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 FAM27E3Q08E93 113 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 FAM69AQ5T7M9 428 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 TFAP2EQ6VUC0 442 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 GPAT4Q86UL3 456 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 NKAIN4Q8IVV8 208 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 MFSD8Q8NHS3 518 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 TMEM255BQ8WV15 326 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 CLPTM1LQ96KA5 538 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 PRRC1Q96M27 445 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 NSMCE2Q96MF7 247 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 MOGAT1Q96PD6 335 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 EPYCQ99645 322 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 SPOCK3Q9BQ16 436 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms