RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR52E4Q8NGH9 312 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR10A6Q8NH74 314 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 TMEM45BQ96B21 275 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 SLC47A1Q96FL8 570 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 FOXC2Q99958 501 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 ECSITQ9BQ95 431 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 ACTR6Q9GZN1 396 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 NGBQ9NPG2 151 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 NOSIPQ9Y314 301 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 ZC3H12DA2A288 527 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR6C65A6NJZ3 312 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 AQP7P3A6NL99 342 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ELOA3DA6NLF2 546 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 M0QX08 132 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 FXYD1O00168 92 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 KLF4O43474 513 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 FRS3O43559 492 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 MRPL33O75394 65 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 COX5AP20674 150 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 FPR1P21462 350 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 PAX7P23759 505 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 NTF4P34130 210 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 RGS8P57771 180 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 HOXC5Q00444 222 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 KEAP1Q14145 624 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 SLC17A1Q14916 467 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ELOA3BQ3SY89 546 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 BEX5Q5H9J7 111 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ALG10BQ5I7T1 473 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 C1orf140Q5VVS0 124 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ZNF613Q6PF04 617 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 COMTD1Q86VU5 262 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 CALHM3Q86XJ0 350 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 WFDC8Q8IUA0 241 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 CCDC103Q8IW40 242 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ZNF100Q8IYN0 542 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ELOA3Q8NG57 546 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 SLC38A4Q969I6 547 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 MBD6Q96DN6 1003 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 EPYCQ99645 322 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ARHGDIGQ99819 225 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 HOPXQ9BPY8 73 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 POLR2J2Q9GZM3 115 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 POLR2J3Q9H1A7 115 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 UBTD1Q9HAC8 227 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 RASD1Q9Y272 281 aa12.22□□□□□ -0.45
SOX2-OT-208ENST00000477928 ACANP16112 2415 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 A0A087WUJ7 227 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 A0A0B4J2E0 115 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 LOC100653049A0A140TA62 436 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 A0A1B0GX12 115 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 FAM220BPB1ANY3 271 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 TMCC2O75069 709 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 KRT34O76011 436 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 AHSA1O95433 338 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 IGHV3-9P01782 118 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 IL32P24001 234 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 DMTNQ08495 405 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 FOXD4Q12950 439 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 CEACAM7Q14002 265 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 SELPLGQ14242 412 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 NRF1Q16656 503 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 OTUD3Q5T2D3 398 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 FAM69AQ5T7M9 428 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 FBXW9Q5XUX1 488 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 HACD2Q6Y1H2 254 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 SNX32Q86XE0 403 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 SLC26A7Q8TE54 656 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 KISS1RQ969F8 398 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 S100PBPQ96BU1 408 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 CMTM5Q96DZ9 223 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 PCDHAC1Q9H158 963 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 MALT1Q9UDY8 824 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 BAG5Q9UL15 447 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 FLVCR1Q9Y5Y0 555 aa12.21□□□□□ -0.45
SOX2-OT-208ENST00000477928 LOC102725191A0A1B0GVB3 256 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 A0A1B0GWA3 101 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 FTCDNL1E5RQL4 147 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 DYNC1I1O14576 645 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 TPST1O60507 370 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 LYZL6O75951 148 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 ADAP00813 363 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 GTF2E2P29084 291 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 AQP1P29972 269 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 PRDX6P30041 224 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 ADAM8P78325 824 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 BNIP2Q12982 314 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 CAPRIN1Q14444 709 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 OR1Q1Q15612 314 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 OR7A5Q15622 319 aa12.2□□□□□ -0.46
SOX2-OT-208ENST00000477928 OR7E24Q6IFN5 339 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms