RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SOAT1P35610 550 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 GPR6P46095 362 aaPredicted RBP17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 PTGR1Q14914 329 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 FAM153CQ494X1 144 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 KANK2Q63ZY3 851 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 C16orf62Q7Z3J2 963 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 LSRQ86X29 649 aaPredicted RBP17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 COQ8BQ96D53 544 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 SUCNR1Q9BXA5 334 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 NARFLQ9H6Q4 476 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 OXSMQ9NWU1 459 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 OSGIN1Q9UJX0 560 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 IGHV2OR16-5A0A0B4J2B6 119 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 ZC3H12DA2A288 527 aaKnown RBP17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 AQP7P3A6NL99 342 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 SKAP2O75563 359 aaPredicted RBP17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 CELA3BP08861 270 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 GAAP10253 952 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 MATN1P21941 496 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 IDH2P48735 452 aaKnown RBP17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 POLR2HP52434 150 aaKnown RBP17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 HBA1P69905 142 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 ATP6AP1LQ52LC2 224 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 ELFN2Q5R3F8 820 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 TYW3Q6IPR3 259 aaKnown RBP17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 C1orf229Q6ZS94 237 aaPredicted RBP17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 LINGO2Q7L985 606 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 CARM1Q86X55 608 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 ARFGAP2Q8N6H7 521 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 MZB1Q8WU39 189 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 SLC35G5Q96KT7 338 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 POLE3Q9NRF9 147 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 WDR45Q9Y484 360 aa17.46■□□□□ 0.39
PDLIM1-202ENST00000477757 NUP214P35658 2090 aaPredicted RBP17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 TRAV20A0A0B4J274 112 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 CFLARO15519 480 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 HOXB1P14653 301 aaPredicted RBP17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 MAP2K6P52564 334 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 SH3BGRP55822 239 aaPredicted RBP17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 ETF1P62495 437 aaKnown RBP17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 SLC9B1Q4ZJI4 515 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 DDIASQ8IXT1 998 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 TMEM99Q8N816 258 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 MRPL24Q96A35 216 aaKnown RBP17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 ESM1Q9NQ30 184 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 EXD2Q9NVH0 621 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 GIMAP2Q9UG22 337 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 PYCARDQ9ULZ3 195 aa17.45■□□□□ 0.38
PDLIM1-202ENST00000477757 LOC105371242A0A075B767 164 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 A0A096LPE4 126 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 A0A1W2PPZ6 126 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 OR6C65A6NJZ3 312 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 LIPT2A6NK58 231 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 AP3D1O14617 1153 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 PLIN3O60664 434 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 LYPLA1O75608 230 aaPredicted RBP17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 AKR7A3O95154 331 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 GPIP06744 558 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 CBR1P16152 277 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 ACHEP22303 614 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 SELENOPP49908 381 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 SNTB2Q13425 540 aaKnown RBP17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 PDCD2Q16342 344 aaPredicted RBP17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 FAHD2BQ6P2I3 314 aaPredicted RBP17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 FRRS1Q6ZNA5 592 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 C6orf120Q7Z4R8 191 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 C1QL2Q7Z5L3 287 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 GPAT4Q86UL3 456 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 KRTCAP2Q8N6L1 136 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 LRRC17Q8N6Y2 441 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 MIPOL1Q8TD10 442 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 TWIST2Q8WVJ9 160 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 FAHD2AQ96GK7 314 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 PRPF18Q99633 342 aaKnown RBP17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 G6PC2Q9NQR9 355 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 TREM2Q9NZC2 230 aa17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 PSMC3IPQ9P2W1 217 aaPredicted RBP17.44■□□□□ 0.38
PDLIM1-202ENST00000477757 RNF103-CHMP3A0A140T963 221 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 CLDN24A6NM45 220 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 M0R233 179 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 WNT9BO14905 357 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 PIP5K1BO14986 540 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 SYNGR3O43761 229 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 AGR2O95994 175 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 AVPP01185 164 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 TACR3P29371 465 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 CASQ1P31415 396 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 LMO4P61968 165 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 KCNJ10P78508 379 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 FUT5Q11128 374 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 CEACAM7Q14002 265 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 CCDC153Q494R4 210 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 TREML4Q6UXN2 200 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 RIMKLAQ8IXN7 391 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 ZDHHC22Q8N966 263 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 IFT81Q8WYA0 676 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 PPP3R2Q96LZ3 170 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 SLC6A7Q99884 636 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 OR51I1Q9H343 314 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 NOX3Q9HBY0 568 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms